Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36435

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,628,722	+		RR42_RS36430	0.80	-4.0
3,628,723	-		RR42_RS36430	0.80	+1.6
3,628,772	-		RR42_RS36430	0.82	-1.6
3,628,804	+		RR42_RS36430	0.84	-0.7
3,629,272	+				+0.2
3,629,306	+				-3.2
3,629,306	+				-0.4
3,629,307	-				+1.5
3,629,307	-				+1.5
3,629,450	+				-0.7
3,629,496	+				+0.5
3,629,496	+				+0.8
3,629,497	-				-1.0
3,629,551	+				-3.8
3,629,552	-				-2.0
3,629,610	+				-4.3
3,629,611	-				+1.1
3,629,632	+		RR42_RS36435	0.12	+0.5
3,629,633	-		RR42_RS36435	0.12	-2.4
3,629,633	-		RR42_RS36435	0.12	-2.7
3,629,710	+		RR42_RS36435	0.18	-2.0
3,629,710	+		RR42_RS36435	0.18	-0.5
3,629,710	+		RR42_RS36435	0.18	+0.6
3,629,710	+		RR42_RS36435	0.18	+0.4
3,629,710	+		RR42_RS36435	0.18	-0.2
3,629,711	-		RR42_RS36435	0.18	+3.0
3,629,711	-		RR42_RS36435	0.18	-0.1
3,629,711	-		RR42_RS36435	0.18	-3.3
3,630,051	+		RR42_RS36435	0.48	-2.8
3,630,087	+		RR42_RS36435	0.51	+0.1
3,630,531	+		RR42_RS36435	0.89	+0.2
3,630,532	-		RR42_RS36435	0.89	+1.5
3,630,723	+				-4.2
3,630,807	+		RR42_RS36440	0.16	+0.0
3,630,807	+		RR42_RS36440	0.16	-0.9
3,630,807	+		RR42_RS36440	0.16	+0.8
3,630,807	+		RR42_RS36440	0.16	-0.0
3,630,809	+		RR42_RS36440	0.16	+0.4
3,630,810	-		RR42_RS36440	0.16	-4.1
3,630,810	-		RR42_RS36440	0.16	-1.1
3,630,810	-		RR42_RS36440	0.16	-0.5
3,630,810	-		RR42_RS36440	0.16	+0.6
3,631,091	+		RR42_RS36440	0.48	+2.7
3,631,092	-		RR42_RS36440	0.48	+1.3
3,631,250	+		RR42_RS36440	0.65	+0.4
3,631,251	-		RR42_RS36440	0.66	+0.8
3,631,251	-		RR42_RS36440	0.66	+0.1
3,631,407	+		RR42_RS36440	0.83	+0.0
3,631,407	+		RR42_RS36440	0.83	+1.1
3,631,408	-		RR42_RS36440	0.83	-3.0
3,631,635	-				+0.8
3,631,635	-				-1.7