Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36380

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,612,697	+		RR42_RS36375	0.47	-0.2
3,612,698	-		RR42_RS36375	0.47	-1.3
3,612,698	-		RR42_RS36375	0.47	+0.3
3,612,879	+		RR42_RS36375	0.59	-2.0
3,612,879	+		RR42_RS36375	0.59	-0.5
3,612,880	-		RR42_RS36375	0.59	-1.3
3,612,883	+		RR42_RS36375	0.59	-2.5
3,612,883	+		RR42_RS36375	0.59	+1.8
3,612,883	+		RR42_RS36375	0.59	+0.7
3,612,884	-		RR42_RS36375	0.59	+1.7
3,612,884	-		RR42_RS36375	0.59	-3.6
3,612,884	-		RR42_RS36375	0.59	-1.7
3,612,910	+		RR42_RS36375	0.61	+2.1
3,612,911	-		RR42_RS36375	0.61	+1.5
3,613,357	+		RR42_RS36375	0.89	-0.4
3,613,357	+		RR42_RS36375	0.89	+1.1
3,613,357	+		RR42_RS36375	0.89	+0.1
3,613,381	+				+1.9
3,613,382	-				+2.7
3,613,462	+				+0.7
3,613,463	-				+1.4
3,613,487	+				+0.2
3,613,528	+				-4.1
3,613,528	+				-1.8
3,613,529	-				-3.1
3,613,731	-				-1.9
3,613,933	+				+1.4
3,613,933	+				+1.0
3,613,933	+				-2.1
3,614,505	-		RR42_RS36380	0.31	+2.5
3,614,558	-		RR42_RS36380	0.32	+1.0
3,614,833	+		RR42_RS36380	0.42	-1.2
3,614,976	-		RR42_RS36380	0.48	-0.1
3,615,383	-		RR42_RS36380	0.62	+2.3
3,615,601	+		RR42_RS36380	0.70	-2.3
3,615,619	+		RR42_RS36380	0.71	-3.2
3,615,620	-		RR42_RS36380	0.71	+2.0
3,616,496	+				+0.9
3,616,497	-				-0.4
3,616,546	+				-2.3
3,616,598	+				+0.7
3,616,637	+				-0.2
3,616,637	+				-4.2
3,616,638	-				+1.0
3,616,638	-				-1.7
3,616,638	-				+3.1
3,616,640	-				+0.2
3,616,667	+				-2.6
3,616,668	-				-3.6
3,616,668	-				-0.7
3,616,940	+		RR42_RS36385	0.20	-3.3
3,616,991	+		RR42_RS36385	0.23	+0.5
3,617,015	+		RR42_RS36385	0.25	+0.7
3,617,120	+		RR42_RS36385	0.31	-1.9
3,617,120	+		RR42_RS36385	0.31	-2.1
3,617,120	+		RR42_RS36385	0.31	+0.7
3,617,120	+		RR42_RS36385	0.31	-1.6
3,617,270	+		RR42_RS36385	0.41	+2.3
3,617,271	-		RR42_RS36385	0.41	+0.1
3,617,271	-		RR42_RS36385	0.41	-0.8
3,617,274	-		RR42_RS36385	0.41	+1.2
3,617,274	-		RR42_RS36385	0.41	+1.6