Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS36140

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,555,030	-				-1.1
3,555,030	-				-1.2
3,555,597	-		RR42_RS36135	0.57	+1.0
3,555,626	+		RR42_RS36135	0.61	-0.2
3,555,627	-		RR42_RS36135	0.61	-1.7
3,555,627	-		RR42_RS36135	0.61	+0.4
3,555,713	+		RR42_RS36135	0.70	+0.1
3,555,713	+		RR42_RS36135	0.70	+0.3
3,555,714	-		RR42_RS36135	0.70	-5.1
3,555,714	-		RR42_RS36135	0.70	-3.2
3,555,737	+		RR42_RS36135	0.73	+1.0
3,555,737	+		RR42_RS36135	0.73	-0.3
3,555,738	-		RR42_RS36135	0.73	+1.1
3,556,119	+		RR42_RS36140	0.12	-3.8
3,556,120	-		RR42_RS36140	0.12	+1.7
3,556,142	+		RR42_RS36140	0.14	-3.3
3,556,142	+		RR42_RS36140	0.14	+0.9
3,556,142	+		RR42_RS36140	0.14	-3.4
3,556,142	+		RR42_RS36140	0.14	+0.1
3,556,142	+		RR42_RS36140	0.14	-0.2
3,556,143	-		RR42_RS36140	0.14	+2.6
3,556,143	-		RR42_RS36140	0.14	-0.3
3,556,143	-		RR42_RS36140	0.14	-0.7
3,556,143	-		RR42_RS36140	0.14	-1.1
3,556,214	+		RR42_RS36140	0.21	+0.8
3,556,214	+		RR42_RS36140	0.21	-0.6
3,556,215	-		RR42_RS36140	0.21	-3.4
3,556,215	-		RR42_RS36140	0.21	-3.4
3,556,215	-		RR42_RS36140	0.21	+1.5
3,556,215	-		RR42_RS36140	0.21	-0.5
3,556,438	-		RR42_RS36140	0.42	+0.2
3,556,577	+		RR42_RS36140	0.56	-4.4
3,556,577	+		RR42_RS36140	0.56	+1.7
3,556,577	+		RR42_RS36140	0.56	+0.2
3,556,578	-		RR42_RS36140	0.56	-3.6
3,556,578	-		RR42_RS36140	0.56	+1.0
3,556,578	-		RR42_RS36140	0.56	-4.2
3,556,607	+		RR42_RS36140	0.58	-3.2
3,556,866	+		RR42_RS36140	0.83	+1.3
3,557,392	+		RR42_RS36145	0.17	-2.4
3,557,392	+		RR42_RS36145	0.17	+1.3
3,557,403	-		RR42_RS36145	0.18	+1.9
3,557,403	-		RR42_RS36145	0.18	-2.4
3,557,403	-		RR42_RS36145	0.18	-2.7
3,557,410	+		RR42_RS36145	0.18	-4.0
3,557,411	-		RR42_RS36145	0.18	-1.6
3,557,411	-		RR42_RS36145	0.18	+0.7
3,557,443	+		RR42_RS36145	0.20	+1.6
3,557,443	+		RR42_RS36145	0.20	-1.6
3,557,444	-		RR42_RS36145	0.20	-3.8
3,557,444	-		RR42_RS36145	0.20	+1.1
3,557,444	-		RR42_RS36145	0.20	+1.9
3,557,444	-		RR42_RS36145	0.20	-0.3
3,557,512	+		RR42_RS36145	0.23	-2.4
3,557,513	-		RR42_RS36145	0.23	-2.9
3,557,513	-		RR42_RS36145	0.23	+0.0
3,557,643	+		RR42_RS36145	0.30	-1.0
3,557,756	-		RR42_RS36145	0.35	-0.4
3,557,926	+		RR42_RS36145	0.44	+0.4
3,557,927	-		RR42_RS36145	0.44	-2.9
3,557,927	-		RR42_RS36145	0.44	+0.5
3,557,927	-		RR42_RS36145	0.44	+1.6