Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35650

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,449,864	+		RR42_RS35645	0.33	-3.8
3,449,865	-		RR42_RS35645	0.33	+0.4
3,449,893	+		RR42_RS35645	0.35	+0.5
3,449,966	+		RR42_RS35645	0.41	-3.2
3,449,967	-		RR42_RS35645	0.41	+1.2
3,449,967	-		RR42_RS35645	0.41	-3.1
3,450,014	+		RR42_RS35645	0.45	+0.0
3,450,089	+		RR42_RS35645	0.51	-0.5
3,450,090	-		RR42_RS35645	0.51	+0.5
3,450,244	+		RR42_RS35645	0.62	-0.9
3,450,244	+		RR42_RS35645	0.62	-0.4
3,450,244	+		RR42_RS35645	0.62	-2.7
3,450,299	-		RR42_RS35645	0.67	-0.3
3,450,414	-		RR42_RS35645	0.75	-1.2
3,450,549	+		RR42_RS35645	0.86	-2.6
3,450,549	+		RR42_RS35645	0.86	+1.8
3,450,549	+		RR42_RS35645	0.86	-3.1
3,450,549	+		RR42_RS35645	0.86	-2.9
3,450,553	+		RR42_RS35645	0.86	-1.0
3,450,685	+				-4.0
3,450,685	+				-0.2
3,450,685	+				-0.4
3,450,685	+				-0.0
3,450,751	+				-0.8
3,450,752	-				-3.5
3,450,841	+		RR42_RS35650	0.10	+0.3
3,450,951	+		RR42_RS35650	0.37	+0.9
3,450,952	-		RR42_RS35650	0.38	+2.3
3,450,952	-		RR42_RS35650	0.38	+0.9
3,450,992	+		RR42_RS35650	0.47	+0.7
3,451,013	+		RR42_RS35650	0.53	+1.7
3,451,014	-		RR42_RS35650	0.53	+2.4
3,451,033	+		RR42_RS35650	0.58	+0.6
3,451,059	+		RR42_RS35650	0.64	-1.9
3,451,060	-		RR42_RS35650	0.64	-1.5
3,451,060	-		RR42_RS35650	0.64	-2.6
3,451,206	+				+1.2
3,451,206	+				+0.4
3,451,207	-				+0.6
3,451,210	+				+0.0
3,451,230	+				-3.7
3,451,231	-				+0.6
3,451,231	-				+1.0
3,451,231	-				-0.8
3,451,246	+				-2.5
3,451,246	+				-3.0
3,451,319	+				-3.4
3,451,425	+		RR42_RS35655	0.22	+0.2
3,451,425	+		RR42_RS35655	0.22	+0.3
3,451,426	-		RR42_RS35655	0.22	-0.9
3,451,566	+		RR42_RS35655	0.53	+2.1
3,451,566	+		RR42_RS35655	0.53	-1.4
3,451,566	+		RR42_RS35655	0.53	-2.0
3,451,571	+		RR42_RS35655	0.54	-0.5
3,451,571	+		RR42_RS35655	0.54	-2.9
3,451,571	+		RR42_RS35655	0.54	+0.4
3,451,571	+		RR42_RS35655	0.54	+1.3
3,451,572	-		RR42_RS35655	0.54	-0.4
3,451,572	-		RR42_RS35655	0.54	-2.0
3,451,592	+		RR42_RS35655	0.59	-0.1
3,451,593	-		RR42_RS35655	0.59	+2.2
3,451,670	+		RR42_RS35655	0.76	-0.2
3,451,670	+		RR42_RS35655	0.76	+1.2
3,451,670	+		RR42_RS35655	0.76	-0.3
3,451,788	-				-0.2
3,451,788	-				+0.7
3,451,788	-				+1.7
3,451,791	-				-0.9
3,451,791	-				-2.1
3,451,835	-				-0.5
3,452,030	+				+0.1
3,452,030	+				-2.1
3,452,030	+				-3.6
3,452,092	-				-2.3