Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35460

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,405,534	+				+1.0
3,405,535	-				+1.5
3,405,535	-				-1.4
3,405,546	+				+0.8
3,405,546	+				+1.2
3,405,546	+				-3.1
3,405,547	-				-1.2
3,405,564	+				+0.3
3,405,783	+		RR42_RS35450	0.54	+1.0
3,405,875	+		RR42_RS35450	0.75	-3.1
3,405,957	-				+1.3
3,406,066	-		RR42_RS35455	0.19	+1.1
3,406,131	+		RR42_RS35455	0.34	-2.3
3,406,131	+		RR42_RS35455	0.34	-1.9
3,406,131	+		RR42_RS35455	0.34	+1.2
3,406,132	-		RR42_RS35455	0.34	-1.5
3,406,191	+		RR42_RS35455	0.48	+1.4
3,406,191	+		RR42_RS35455	0.48	-0.2
3,406,221	+		RR42_RS35455	0.55	+0.2
3,406,222	-		RR42_RS35455	0.55	+0.3
3,406,412	+				-1.1
3,406,412	+				+0.4
3,406,413	-				-3.6
3,406,413	-				+2.9
3,406,463	+				+0.2
3,406,464	-				-1.5
3,406,487	+				-0.2
3,406,488	-				-2.7
3,406,488	-				-0.9
3,406,574	+		RR42_RS35460	0.12	-1.0
3,406,575	-		RR42_RS35460	0.12	-2.5
3,406,584	+		RR42_RS35460	0.13	+0.6
3,406,745	+		RR42_RS35460	0.33	+1.9
3,406,787	+		RR42_RS35460	0.38	-0.1
3,406,787	+		RR42_RS35460	0.38	+1.4
3,406,788	-		RR42_RS35460	0.38	+1.4
3,406,800	-		RR42_RS35460	0.39	+1.1
3,407,032	-		RR42_RS35460	0.68	-0.9
3,407,052	+		RR42_RS35460	0.70	+1.1
3,407,052	+		RR42_RS35460	0.70	+0.3
3,407,053	-		RR42_RS35460	0.70	-1.6
3,407,053	-		RR42_RS35460	0.70	-0.3
3,407,053	-		RR42_RS35460	0.70	-3.3
3,407,079	+		RR42_RS35460	0.74	-0.4
3,407,079	+		RR42_RS35460	0.74	+1.7
3,407,080	-		RR42_RS35460	0.74	-1.9
3,407,207	+		RR42_RS35460	0.89	+0.3
3,407,298	-				+0.6
3,407,307	+				-0.9
3,407,307	+				+0.4
3,407,307	+				+0.9
3,407,314	+				-3.0
3,407,314	+				-1.8
3,407,314	+				+0.7
3,407,314	+				+1.3
3,407,315	-				+1.3
3,407,320	+				-4.3
3,407,372	+				+0.6
3,407,373	-				+1.8
3,407,373	-				+0.8
3,407,396	-				-2.2
3,407,431	+				-1.6
3,407,432	-				+1.0
3,407,593	+		RR42_RS35465	0.22	-0.5
3,407,628	-		RR42_RS35465	0.27	+2.3
3,407,628	-		RR42_RS35465	0.27	+1.3
3,407,643	+		RR42_RS35465	0.29	+1.0
3,407,789	+		RR42_RS35465	0.48	+0.4
3,407,789	+		RR42_RS35465	0.48	-1.9
3,407,789	+		RR42_RS35465	0.48	-2.3
3,407,789	+		RR42_RS35465	0.48	-0.6
3,407,790	-		RR42_RS35465	0.48	+1.6
3,407,790	-		RR42_RS35465	0.48	+0.5
3,407,790	-		RR42_RS35465	0.48	-1.7
3,407,790	-		RR42_RS35465	0.48	-2.2
3,407,790	-		RR42_RS35465	0.48	-2.2
3,407,791	+		RR42_RS35465	0.48	+0.3
3,407,791	+		RR42_RS35465	0.48	+1.2
3,407,791	+		RR42_RS35465	0.48	-0.3
3,407,791	+		RR42_RS35465	0.48	+1.5
3,407,791	+		RR42_RS35465	0.48	-1.1
3,407,792	-		RR42_RS35465	0.48	+1.3
3,407,792	-		RR42_RS35465	0.48	-0.0
3,407,792	-		RR42_RS35465	0.48	-3.0
3,407,901	-		RR42_RS35465	0.62	-2.0
3,407,966	+		RR42_RS35465	0.70	-1.1
3,407,967	-		RR42_RS35465	0.70	-2.1
3,408,029	+		RR42_RS35465	0.78	+0.9
3,408,029	+		RR42_RS35465	0.78	-2.8
3,408,030	-		RR42_RS35465	0.78	+1.4
3,408,058	+		RR42_RS35465	0.82	-0.9
3,408,059	-		RR42_RS35465	0.82	+1.2
3,408,059	-		RR42_RS35465	0.82	-0.5
3,408,144	-				-0.7
3,408,198	-				-3.8
3,408,247	+				-1.1
3,408,291	-				-3.6