Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35420

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,398,662	+				-2.3
3,398,662	+				-0.4
3,398,662	+				-2.4
3,398,662	+				+0.8
3,398,662	+				+0.7
3,398,663	-				+0.4
3,398,663	-				+0.2
3,398,732	+				-1.8
3,398,733	-				+0.5
3,398,760	+				+0.5
3,398,761	-				+1.0
3,398,860	+		RR42_RS35415	0.16	+2.9
3,398,861	-		RR42_RS35415	0.16	+0.3
3,398,876	-		RR42_RS35415	0.19	-3.0
3,398,876	-		RR42_RS35415	0.19	+0.1
3,398,945	+		RR42_RS35415	0.31	-2.2
3,398,945	+		RR42_RS35415	0.31	-0.4
3,398,945	+		RR42_RS35415	0.31	-1.8
3,398,945	+		RR42_RS35415	0.31	+0.6
3,398,946	-		RR42_RS35415	0.32	+0.6
3,398,946	-		RR42_RS35415	0.32	+0.7
3,398,946	-		RR42_RS35415	0.32	-3.4
3,398,946	-		RR42_RS35415	0.32	-2.4
3,399,212	+		RR42_RS35415	0.79	+1.1
3,399,213	-		RR42_RS35415	0.79	-0.8
3,399,255	-		RR42_RS35415	0.87	-0.2
3,399,255	-		RR42_RS35415	0.87	+0.1
3,399,312	+				+1.1
3,399,343	+				-3.5
3,399,344	-				-0.5
3,399,352	+				+1.5
3,399,352	+				+1.0
3,399,353	-				-3.0
3,399,353	-				-2.6
3,399,353	-				-3.4
3,399,353	-				-0.2
3,399,353	-				-3.6
3,399,353	-				+0.5
3,399,449	+				-3.7
3,399,450	-				-3.1
3,399,450	-				-2.6
3,399,466	+				-4.1
3,399,478	-				-2.5
3,399,558	+				-0.3
3,399,749	+		RR42_RS35420	0.15	-2.8
3,399,749	+		RR42_RS35420	0.15	-3.4
3,399,750	-		RR42_RS35420	0.15	+1.7
3,399,753	+		RR42_RS35420	0.16	+0.3
3,399,753	+		RR42_RS35420	0.16	-1.3
3,399,753	+		RR42_RS35420	0.16	-0.3
3,399,753	+		RR42_RS35420	0.16	+0.0
3,399,754	-		RR42_RS35420	0.16	-0.0
3,399,754	-		RR42_RS35420	0.16	-1.8
3,399,754	-		RR42_RS35420	0.16	+0.1
3,399,754	-		RR42_RS35420	0.16	+2.0
3,399,754	-		RR42_RS35420	0.16	+0.7
3,399,754	-		RR42_RS35420	0.16	+1.4
3,399,754	-		RR42_RS35420	0.16	+1.5
3,399,754	-		RR42_RS35420	0.16	+0.3
3,399,754	-		RR42_RS35420	0.16	-1.9
3,399,754	-		RR42_RS35420	0.16	-0.4
3,399,754	-		RR42_RS35420	0.16	-4.0
3,399,921	-		RR42_RS35420	0.42	-0.9
3,399,921	-		RR42_RS35420	0.42	-3.1
3,399,921	-		RR42_RS35420	0.42	+1.2
3,399,925	-		RR42_RS35420	0.43	-4.1
3,400,153	+		RR42_RS35420	0.78	-0.5
3,400,215	+		RR42_RS35420	0.88	-0.6
3,400,216	-		RR42_RS35420	0.88	-0.4
3,400,302	-				-1.4
3,400,316	-				+1.7
3,400,357	+				-0.0
3,400,357	+				+1.0
3,400,357	+				+0.3
3,400,358	-				-0.4
3,400,358	-				+1.2
3,400,358	-				-0.6
3,400,368	-				-3.4
3,400,414	+				+0.6
3,400,414	+				+0.1
3,400,414	+				-1.5
3,400,415	-				-2.0
3,400,415	-				-2.5
3,400,543	-		RR42_RS35425	0.24	-1.5
3,400,601	+		RR42_RS35425	0.35	-0.6
3,400,777	+		RR42_RS35425	0.68	-0.4
3,400,778	-		RR42_RS35425	0.69	-2.2
3,400,810	+		RR42_RS35425	0.75	+1.7
3,400,810	+		RR42_RS35425	0.75	+0.5
3,400,929	+				-1.5
3,401,026	+				-3.6
3,401,026	+				-3.9
3,401,065	-				+1.7
3,401,120	+				-2.1
3,401,225	+				+0.7
3,401,225	+				-0.3
3,401,225	+				-0.2
3,401,226	-				-1.5
3,401,234	+				+1.0
3,401,234	+				-1.7
3,401,235	-				-0.4
3,401,235	-				+0.5
3,401,270	-				+0.8
3,401,279	-				-2.0