Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS35225

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,354,483	-		RR42_RS35220	0.30	-1.0
3,354,483	-		RR42_RS35220	0.30	-3.1
3,354,506	+		RR42_RS35220	0.32	-1.3
3,355,340	+				+0.0
3,355,340	+				-1.3
3,355,341	-				+0.2
3,355,371	-				-1.7
3,355,377	-				+2.0
3,355,395	+				-2.5
3,355,396	-				+2.6
3,355,397	+				+1.8
3,355,398	-				-0.9
3,355,398	-				-3.3
3,355,497	-		RR42_RS35225	0.15	-0.1
3,355,576	-		RR42_RS35225	0.19	+0.7
3,355,576	-		RR42_RS35225	0.19	+1.0
3,355,688	+		RR42_RS35225	0.26	+0.1
3,355,688	+		RR42_RS35225	0.26	+0.8
3,355,811	+		RR42_RS35225	0.33	-2.3
3,356,015	+		RR42_RS35225	0.45	-2.6
3,356,015	+		RR42_RS35225	0.45	+1.2
3,356,016	-		RR42_RS35225	0.45	-2.7
3,356,016	-		RR42_RS35225	0.45	-1.8
3,356,016	-		RR42_RS35225	0.45	+0.0
3,356,198	+		RR42_RS35225	0.56	+0.7
3,356,198	+		RR42_RS35225	0.56	-1.4
3,356,231	+		RR42_RS35225	0.58	+1.2
3,356,232	-		RR42_RS35225	0.58	-1.4
3,356,364	-		RR42_RS35225	0.65	+0.0
3,356,429	+		RR42_RS35225	0.69	+0.8
3,356,468	+		RR42_RS35225	0.71	-1.7
3,356,468	+		RR42_RS35225	0.71	-1.9
3,356,469	-		RR42_RS35225	0.71	+0.2
3,356,469	-		RR42_RS35225	0.71	+1.5
3,356,507	+		RR42_RS35225	0.74	-0.1
3,356,687	+		RR42_RS35225	0.84	-0.2
3,356,687	+		RR42_RS35225	0.84	-2.1
3,356,759	+		RR42_RS35225	0.88	+1.1
3,356,759	+		RR42_RS35225	0.88	+0.9
3,356,759	+		RR42_RS35225	0.88	-1.0
3,356,817	-				-2.0
3,356,846	+				-1.4
3,356,847	-				-0.5
3,356,929	+				+0.0
3,356,929	+				+0.4
3,356,930	-				-2.5
3,356,930	-				+0.8
3,356,930	-				-1.7
3,357,031	-				-1.5
3,357,315	+		RR42_RS35230	0.36	+0.0
3,357,315	+		RR42_RS35230	0.36	+0.8
3,357,315	+		RR42_RS35230	0.36	-1.2
3,357,315	+		RR42_RS35230	0.36	-1.8
3,357,315	+		RR42_RS35230	0.36	+0.7
3,357,316	-		RR42_RS35230	0.36	-3.3
3,357,316	-		RR42_RS35230	0.36	+1.4
3,357,316	-		RR42_RS35230	0.36	-0.3
3,357,316	-		RR42_RS35230	0.36	+0.3
3,357,316	-		RR42_RS35230	0.36	-1.2
3,357,603	+		RR42_RS35230	0.67	+0.2