Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34665

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,217,766	+		RR42_RS34660	0.28	+0.9
3,217,766	+		RR42_RS34660	0.28	+1.4
3,217,767	-		RR42_RS34660	0.28	-0.6
3,217,770	-		RR42_RS34660	0.28	+1.1
3,217,806	-		RR42_RS34660	0.31	+0.3
3,217,902	-		RR42_RS34660	0.40	-5.3
3,217,952	+		RR42_RS34660	0.45	-0.1
3,217,952	+		RR42_RS34660	0.45	+1.2
3,217,952	+		RR42_RS34660	0.45	+0.8
3,217,953	-		RR42_RS34660	0.45	-2.5
3,217,953	-		RR42_RS34660	0.45	+1.3
3,217,953	-		RR42_RS34660	0.45	+0.6
3,217,953	-		RR42_RS34660	0.45	+1.5
3,217,971	-		RR42_RS34660	0.47	-1.0
3,218,060	+		RR42_RS34660	0.55	-2.0
3,218,151	+		RR42_RS34660	0.63	-0.1
3,218,151	+		RR42_RS34660	0.63	-2.3
3,218,152	-		RR42_RS34660	0.63	-2.0
3,218,152	-		RR42_RS34660	0.63	-0.0
3,218,152	-				+2.0
3,218,153	+		RR42_RS34660	0.64	+0.8
3,218,153	+		RR42_RS34660	0.64	-1.0
3,218,154	-		RR42_RS34660	0.64	+0.3
3,218,154	-		RR42_RS34660	0.64	+0.7
3,218,174	+		RR42_RS34660	0.65	+1.7
3,218,174	+		RR42_RS34660	0.65	+0.0
3,218,175	-		RR42_RS34660	0.66	-0.5
3,218,175	-		RR42_RS34660	0.66	-3.5
3,218,175	-		RR42_RS34660	0.66	-4.0
3,218,175	-		RR42_RS34660	0.66	-2.3
3,218,183	+		RR42_RS34660	0.66	+0.3
3,218,241	-		RR42_RS34660	0.72	-1.2
3,218,241	-		RR42_RS34660	0.72	-0.7
3,218,257	+		RR42_RS34660	0.73	-1.2
3,218,257	+		RR42_RS34660	0.73	-1.2
3,218,386	-		RR42_RS34660	0.85	-0.0
3,218,447	+				-0.2
3,218,460	+				+1.1
3,218,613	+				+1.0
3,218,613	+				+0.1
3,218,613	+				-2.8
3,218,613	+				-0.0
3,218,614	-				+1.1
3,218,731	-				-1.5
3,218,880	+		RR42_RS34665	0.47	+2.1
3,218,880	+		RR42_RS34665	0.47	+1.4
3,218,880	+		RR42_RS34665	0.47	+0.2
3,218,880	+		RR42_RS34665	0.47	+0.1
3,218,881	-		RR42_RS34665	0.47	-2.4
3,218,881	-		RR42_RS34665	0.47	+2.0
3,218,881	-		RR42_RS34665	0.47	+1.0
3,218,881	-		RR42_RS34665	0.47	+1.3
3,219,025	-				-3.9
3,219,104	+				-3.2
3,219,137	+				-1.7
3,219,138	-				-0.6
3,219,138	-				-1.2
3,219,138	-				-2.9
3,219,251	+		RR42_RS34670	0.20	-4.2
3,219,251	+		RR42_RS34670	0.20	+0.6
3,219,251	+		RR42_RS34670	0.20	+0.2
3,219,252	-		RR42_RS34670	0.20	-1.8
3,219,252	-		RR42_RS34670	0.20	+0.8
3,219,252	-		RR42_RS34670	0.20	-0.3
3,219,252	-		RR42_RS34670	0.20	+1.8
3,219,252	-		RR42_RS34670	0.20	-2.5
3,219,252	-		RR42_RS34670	0.20	+0.1
3,219,255	+		RR42_RS34670	0.20	-2.2
3,219,255	+		RR42_RS34670	0.20	-3.3
3,219,255	+		RR42_RS34670	0.20	+0.4
3,219,256	-		RR42_RS34670	0.21	-1.0
3,219,256	-		RR42_RS34670	0.21	-1.0
3,219,256	-		RR42_RS34670	0.21	-0.5
3,219,256	-		RR42_RS34670	0.21	-2.6
3,219,365	+		RR42_RS34670	0.32	+0.4
3,219,365	+		RR42_RS34670	0.32	+1.7
3,219,386	+		RR42_RS34670	0.34	-3.1
3,219,638	+		RR42_RS34670	0.60	-1.0
3,219,684	+		RR42_RS34670	0.64	+0.7
3,219,684	+		RR42_RS34670	0.64	-0.7
3,219,685	-		RR42_RS34670	0.64	+0.8
3,220,023	+				+1.0