Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34560

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,195,200	+				+0.2
3,195,200	+				+0.3
3,195,314	-				+1.0
3,195,326	-				-1.7
3,195,364	+		RR42_RS34555	0.13	+0.3
3,195,375	-		RR42_RS34555	0.14	-1.5
3,195,375	-		RR42_RS34555	0.14	+0.8
3,195,688	-		RR42_RS34555	0.68	-1.0
3,195,863	-				-2.0
3,195,988	+				-1.0
3,195,988	+				-1.4
3,195,988	+				+1.2
3,195,988	+				-0.3
3,195,988	+				-2.9
3,195,988	+				-1.6
3,195,989	-				+0.7
3,195,989	-				-1.6
3,195,989	-				-2.6
3,195,989	-				+0.2
3,195,989	-				-2.3
3,195,989	-				-0.9
3,196,167	+				-0.4
3,196,189	-				+1.4
3,196,408	+		RR42_RS34560	0.24	+0.5
3,196,498	+		RR42_RS34560	0.35	+0.9
3,196,498	+		RR42_RS34560	0.35	+0.1
3,196,498	+		RR42_RS34560	0.35	-3.1
3,196,499	-		RR42_RS34560	0.35	+0.2
3,196,499	-		RR42_RS34560	0.35	-0.3
3,196,499	-				-0.4
3,196,499	-		RR42_RS34560	0.35	+1.6
3,196,499	-		RR42_RS34560	0.35	+1.7
3,196,499	-		RR42_RS34560	0.35	+1.1
3,196,502	+		RR42_RS34560	0.35	-2.2
3,196,502	+		RR42_RS34560	0.35	+1.0
3,196,583	+		RR42_RS34560	0.44	-1.9
3,196,651	+		RR42_RS34560	0.52	-0.5
3,196,651	+		RR42_RS34560	0.52	+0.1
3,196,940	-		RR42_RS34560	0.85	-0.6
3,196,979	-		RR42_RS34560	0.90	-1.1
3,197,129	+				+0.0
3,197,340	-		RR42_RS34565	0.16	+1.4
3,197,340	-		RR42_RS34565	0.16	-3.2
3,197,397	-		RR42_RS34565	0.29	+1.5
3,197,411	+		RR42_RS34565	0.32	+0.5
3,197,412	-		RR42_RS34565	0.32	+0.4
3,197,680	-				-1.6
3,197,712	+				-2.1
3,197,748	-				-0.6
3,197,768	+				-0.6
3,197,787	+				-4.3
3,197,787	+				-5.0
3,197,788	-				-0.3
3,197,788	-				+0.6
3,197,953	+				-3.9
3,198,001	+				+0.4
3,198,001	+				-4.1
3,198,001	+				-3.9
3,198,001	+				-3.6
3,198,002	-				+0.6
3,198,041	-				+0.7