Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34080

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,073,815	+		RR42_RS34070	0.76	+1.0
3,073,815	+		RR42_RS34070	0.76	-1.5
3,073,816	-		RR42_RS34070	0.77	-2.2
3,073,866	+		RR42_RS34070	0.82	-0.4
3,073,867	-		RR42_RS34070	0.82	-0.3
3,073,871	+		RR42_RS34070	0.82	+0.5
3,073,871	+		RR42_RS34070	0.82	+0.3
3,073,931	-		RR42_RS34070	0.88	-1.3
3,073,931	-		RR42_RS34070	0.88	+0.0
3,073,931	-		RR42_RS34070	0.88	+0.8
3,074,001	-				-3.1
3,074,069	-				+0.7
3,074,069	-				-0.4
3,074,069	-				-2.1
3,074,069	-				-1.5
3,074,147	-				+2.0
3,074,147	-				-0.5
3,074,223	+				-0.0
3,074,351	+				+1.4
3,074,351	+				-3.1
3,074,351	+				-0.2
3,074,352	-				+1.3
3,074,488	+		RR42_RS34075	0.38	+0.0
3,074,488	+		RR42_RS34075	0.38	+1.6
3,074,488	+		RR42_RS34075	0.38	+1.4
3,074,489	-		RR42_RS34075	0.38	-2.9
3,074,520	+		RR42_RS34075	0.46	-0.5
3,074,521	-		RR42_RS34075	0.46	-0.4
3,074,555	+		RR42_RS34075	0.55	-1.8
3,074,555	+		RR42_RS34075	0.55	+0.2
3,074,595	+		RR42_RS34075	0.66	+1.4
3,074,596	-		RR42_RS34075	0.66	+0.9
3,074,596	-		RR42_RS34075	0.66	+1.4
3,074,598	+		RR42_RS34075	0.67	-1.2
3,074,598	+		RR42_RS34075	0.67	-3.0
3,074,598	+		RR42_RS34075	0.67	-1.1
3,074,755	+				-0.0
3,074,877	-				+0.6
3,074,877	-				-3.3
3,074,877	-				+0.6
3,074,945	+		RR42_RS34080	0.16	+1.3
3,074,945	+		RR42_RS34080	0.16	+2.0
3,074,946	-		RR42_RS34080	0.16	+1.7
3,074,946	-		RR42_RS34080	0.16	-2.3
3,074,946	-		RR42_RS34080	0.16	-0.9
3,075,086	+		RR42_RS34080	0.32	-1.5
3,075,087	-		RR42_RS34080	0.33	+0.3
3,075,087	-		RR42_RS34080	0.33	-1.1
3,075,241	+		RR42_RS34080	0.50	+0.7
3,075,242	-		RR42_RS34080	0.51	-3.3
3,075,260	-		RR42_RS34080	0.53	-0.9
3,075,533	+		RR42_RS34080	0.84	-1.5
3,075,534	-		RR42_RS34080	0.85	-0.2
3,075,535	+		RR42_RS34080	0.85	-2.3
3,075,535	+		RR42_RS34080	0.85	-2.3
3,075,535	+		RR42_RS34080	0.85	+2.8
3,075,535	+		RR42_RS34080	0.85	+0.7
3,075,535	+		RR42_RS34080	0.85	-0.5
3,075,535	+		RR42_RS34080	0.85	-3.3
3,075,536	-		RR42_RS34080	0.85	+0.8
3,075,587	+				-0.1
3,075,587	+				+3.3
3,075,587	+				-1.9
3,075,587	+				+2.7
3,075,587	+				+0.7
3,075,587	+				+0.1
3,075,587	+				+0.4
3,075,588	-				-0.8
3,075,588	-				-3.7
3,075,588	-				+2.5
3,075,588	-				+1.6
3,075,588	-				-0.2
3,075,656	-				-1.9
3,075,799	+				-0.9
3,075,926	-		RR42_RS34085	0.11	+0.5
3,075,926	-		RR42_RS34085	0.11	-0.4
3,075,981	+		RR42_RS34085	0.19	+0.6
3,075,981	+		RR42_RS34085	0.19	+1.4
3,076,083	-		RR42_RS34085	0.36	+0.1
3,076,125	+		RR42_RS34085	0.42	+0.5
3,076,125	+		RR42_RS34085	0.42	-4.2
3,076,126	-		RR42_RS34085	0.42	+1.2
3,076,228	-		RR42_RS34085	0.58	+0.4
3,076,228	-		RR42_RS34085	0.58	-1.1
3,076,266	+		RR42_RS34085	0.64	+1.1
3,076,267	-		RR42_RS34085	0.65	+0.5
3,076,310	+		RR42_RS34085	0.71	+1.3
3,076,310	+		RR42_RS34085	0.71	+0.2
3,076,310	+		RR42_RS34085	0.71	+0.5
3,076,315	-		RR42_RS34085	0.72	-0.5
3,076,383	+		RR42_RS34085	0.83	+1.1
3,076,384	-		RR42_RS34085	0.83	+1.2
3,076,438	+				+0.3
3,076,439	-				+0.9
3,076,466	-				-3.6
3,076,510	-				-2.6
3,076,654	+				-0.8
3,076,655	-				-3.8
3,076,655	-				-0.8