Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34035

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,065,362	+				-1.6
3,065,362	+				-1.5
3,065,362	+				+0.5
3,065,362	+				+0.9
3,065,362	+				-1.3
3,065,362	+				-0.5
3,065,362	+				-0.1
3,065,363	-				-2.1
3,065,363	-				-0.4
3,065,363	-				+0.8
3,065,367	+				+0.1
3,065,367	+				+0.4
3,065,367	+				+0.8
3,065,368	-				-2.8
3,065,368	-				-0.7
3,065,457	-				+1.6
3,065,457	-				-2.4
3,065,520	+				+0.5
3,065,520	+				-2.5
3,065,521	-				+2.2
3,065,521	-				-0.3
3,065,562	-				-2.8
3,065,611	-				-1.6
3,065,611	-				-2.1
3,065,746	+		RR42_RS34030	0.28	+1.0
3,065,746	+		RR42_RS34030	0.28	+1.0
3,065,945	+		RR42_RS34030	0.60	-3.0
3,065,945	+		RR42_RS34030	0.60	+0.1
3,065,945	+		RR42_RS34030	0.60	-0.9
3,065,946	-		RR42_RS34030	0.60	+0.9
3,065,946	-		RR42_RS34030	0.60	-0.8
3,065,946	-		RR42_RS34030	0.60	-0.0
3,065,946	-		RR42_RS34030	0.60	-2.2
3,065,946	-		RR42_RS34030	0.60	-1.6
3,065,948	+		RR42_RS34030	0.60	+1.3
3,065,949	-		RR42_RS34030	0.60	+0.3
3,066,056	+		RR42_RS34030	0.77	-0.6
3,066,056	+		RR42_RS34030	0.77	-0.5
3,066,057	-		RR42_RS34030	0.77	-3.7
3,066,116	+		RR42_RS34030	0.87	+1.1
3,066,116	+		RR42_RS34030	0.87	+0.4
3,066,198	+				+1.0
3,066,199	-				+0.1
3,066,199	-				+0.4
3,066,282	+				-4.1
3,066,395	+				-1.4
3,066,434	+				-0.9
3,066,435	-				+1.3
3,066,460	+		RR42_RS34035	0.12	+0.2
3,066,460	+		RR42_RS34035	0.12	+1.0
3,066,460	+		RR42_RS34035	0.12	-4.5
3,066,461	-		RR42_RS34035	0.12	+0.8
3,066,463	+		RR42_RS34035	0.12	+1.5
3,066,463	+		RR42_RS34035	0.12	-0.1
3,066,464	-		RR42_RS34035	0.12	-2.9
3,066,464	-		RR42_RS34035	0.12	-1.8
3,066,533	-		RR42_RS34035	0.19	-2.0
3,066,551	+		RR42_RS34035	0.20	-2.4
3,066,552	-		RR42_RS34035	0.20	-0.9
3,066,552	-		RR42_RS34035	0.20	-0.0
3,066,552	-		RR42_RS34035	0.20	+0.3
3,066,553	+		RR42_RS34035	0.20	-0.2
3,066,553	+		RR42_RS34035	0.20	+0.1
3,066,553	+		RR42_RS34035	0.20	-3.2
3,066,554	-		RR42_RS34035	0.21	+1.5
3,066,554	-		RR42_RS34035	0.21	-0.6
3,066,554	-		RR42_RS34035	0.21	+0.4
3,066,554	-		RR42_RS34035	0.21	-0.5
3,066,749	+		RR42_RS34035	0.39	+0.1
3,066,749	+		RR42_RS34035	0.39	+0.6
3,066,749	+		RR42_RS34035	0.39	-0.7
3,066,750	-		RR42_RS34035	0.39	+1.9
3,066,825	+		RR42_RS34035	0.46	-0.5
3,066,872	-		RR42_RS34035	0.50	-3.3
3,066,923	-		RR42_RS34035	0.55	-2.5
3,067,075	+		RR42_RS34035	0.69	-3.4
3,067,075	+		RR42_RS34035	0.69	-3.9
3,067,076	-		RR42_RS34035	0.69	+0.7
3,067,076	-		RR42_RS34035	0.69	+2.2
3,067,076	-		RR42_RS34035	0.69	+0.2
3,067,076	-		RR42_RS34035	0.69	+0.2
3,067,076	-		RR42_RS34035	0.69	-3.2
3,067,111	+		RR42_RS34035	0.72	-0.0
3,067,201	+		RR42_RS34035	0.80	+1.6
3,067,201	+		RR42_RS34035	0.80	-3.4
3,067,319	+				+2.4
3,067,319	+				-2.9
3,067,363	+				-1.4
3,067,364	-				+0.5
3,067,364	-				+2.2
3,067,364	-				+1.5
3,067,364	-				-2.0
3,067,385	-				-1.0
3,067,385	-				+0.2
3,067,462	+				-1.4
3,067,463	-				+0.0
3,067,524	+				+0.0
3,067,525	-				-2.5
3,067,525	-				+0.1
3,067,525	-				+1.1
3,067,592	+		RR42_RS34040	0.16	-2.4
3,067,711	+		RR42_RS34040	0.31	+1.0
3,067,923	+		RR42_RS34040	0.58	+0.8
3,067,923	+		RR42_RS34040	0.58	+1.2
3,067,995	+		RR42_RS34040	0.67	+0.5
3,067,995	+		RR42_RS34040	0.67	-0.2
3,067,995	+		RR42_RS34040	0.67	+0.9
3,067,996	-		RR42_RS34040	0.67	-2.8
3,067,996	-		RR42_RS34040	0.67	+0.7
3,067,996	-		RR42_RS34040	0.67	+0.1
3,067,999	+		RR42_RS34040	0.67	-1.9
3,068,000	-		RR42_RS34040	0.68	-2.5
3,068,063	+		RR42_RS34040	0.76	-2.7
3,068,064	-		RR42_RS34040	0.76	+0.3
3,068,064	-		RR42_RS34040	0.76	-2.4
3,068,064	-		RR42_RS34040	0.76	+0.6
3,068,064	-		RR42_RS34040	0.76	+1.4
3,068,069	+		RR42_RS34040	0.76	+0.1
3,068,070	-		RR42_RS34040	0.76	+0.0
3,068,351	+				-1.1
3,068,364	-				-0.4