Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34025

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,063,430	-		RR42_RS34020	0.46	-0.3
3,063,430	-		RR42_RS34020	0.46	+1.8
3,063,484	+		RR42_RS34020	0.58	+1.2
3,063,484	+		RR42_RS34020	0.58	+2.5
3,063,553	+		RR42_RS34020	0.73	+2.7
3,063,554	-		RR42_RS34020	0.73	-0.4
3,063,595	-		RR42_RS34020	0.82	+0.3
3,063,792	+				-0.6
3,063,792	+				+0.4
3,063,793	-				-4.1
3,063,835	-				-3.1
3,064,040	-				-0.8
3,064,099	+				+1.4
3,064,100	-				+0.8
3,064,171	+				-1.4
3,064,172	-				-2.4
3,064,355	-		RR42_RS34025	0.12	-1.0
3,064,487	+		RR42_RS34025	0.35	-1.5
3,064,487	+		RR42_RS34025	0.35	-0.8
3,064,487	+		RR42_RS34025	0.35	+1.2
3,064,487	+		RR42_RS34025	0.35	-2.1
3,064,488	-		RR42_RS34025	0.35	+2.5
3,064,488	-		RR42_RS34025	0.35	+2.5
3,064,643	+		RR42_RS34025	0.63	+0.9
3,064,643	+		RR42_RS34025	0.63	+0.0
3,064,644	-		RR42_RS34025	0.63	-0.5
3,064,644	-		RR42_RS34025	0.63	-2.5
3,064,645	+		RR42_RS34025	0.63	-0.4
3,064,645	+		RR42_RS34025	0.63	+0.4
3,064,645	+		RR42_RS34025	0.63	-1.7
3,064,645	+		RR42_RS34025	0.63	-0.5
3,064,646	-		RR42_RS34025	0.63	-0.0
3,064,646	-		RR42_RS34025	0.63	-2.8
3,064,847	+				+0.6
3,064,847	+				-2.2
3,064,847	+				-1.4
3,064,847	+				+0.4
3,064,847	+				-2.0
3,064,847	+				-0.2
3,064,967	+				-3.7
3,064,968	-				+0.2
3,065,082	+				-1.0
3,065,083	-				-1.3
3,065,152	+				+2.7
3,065,152	+				+0.9
3,065,152	+				-1.1
3,065,169	-				+0.1
3,065,179	-				-0.2
3,065,179	-				-0.9
3,065,239	-				-1.3
3,065,362	+				-1.6
3,065,362	+				-1.5
3,065,362	+				+0.5
3,065,362	+				+0.9
3,065,362	+				-1.3
3,065,362	+				-0.5
3,065,362	+				-0.1
3,065,363	-				-2.1
3,065,363	-				-0.4
3,065,363	-				+0.8
3,065,367	+				+0.1
3,065,367	+				+0.4
3,065,367	+				+0.8
3,065,368	-				-2.8
3,065,368	-				-0.7
3,065,457	-				+1.6
3,065,457	-				-2.4
3,065,520	+				+0.5
3,065,520	+				-2.5
3,065,521	-				+2.2
3,065,521	-				-0.3
3,065,562	-				-2.8
3,065,611	-				-1.6
3,065,611	-				-2.1
3,065,746	+		RR42_RS34030	0.28	+1.0
3,065,746	+		RR42_RS34030	0.28	+1.0