Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34020

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,062,239	-		RR42_RS34015	0.28	+0.9
3,062,494	+		RR42_RS34015	0.50	-1.6
3,062,563	-		RR42_RS34015	0.56	-1.0
3,062,563	-		RR42_RS34015	0.56	-2.0
3,062,563	-		RR42_RS34015	0.56	+1.9
3,062,614	-		RR42_RS34015	0.61	-0.5
3,062,653	+		RR42_RS34015	0.64	+0.8
3,062,654	-		RR42_RS34015	0.64	+1.4
3,062,654	-		RR42_RS34015	0.64	+0.5
3,062,751	+		RR42_RS34015	0.73	+0.9
3,062,805	+		RR42_RS34015	0.78	+0.7
3,062,805	+		RR42_RS34015	0.78	+1.5
3,062,812	+		RR42_RS34015	0.78	+0.7
3,062,878	+		RR42_RS34015	0.84	-0.3
3,062,879	-		RR42_RS34015	0.84	-0.3
3,063,079	+				-0.4
3,063,079	+				+0.3
3,063,079	+				-1.2
3,063,079	+				+1.1
3,063,154	+				-2.2
3,063,168	+				-0.4
3,063,169	-				-1.2
3,063,169	-				-0.2
3,063,172	+				+0.4
3,063,173	-				-3.0
3,063,173	-				-1.0
3,063,188	+				-1.4
3,063,189	-				+0.0
3,063,204	+				+0.5
3,063,204	+				+1.4
3,063,205	-				+2.7
3,063,205	-				-2.6
3,063,205	-				-4.3
3,063,205	-				-1.3
3,063,205	-				+0.2
3,063,246	+				-4.1
3,063,430	-		RR42_RS34020	0.46	-0.3
3,063,430	-		RR42_RS34020	0.46	+1.8
3,063,484	+		RR42_RS34020	0.58	+1.2
3,063,484	+		RR42_RS34020	0.58	+2.5
3,063,553	+		RR42_RS34020	0.73	+2.7
3,063,554	-		RR42_RS34020	0.73	-0.4
3,063,595	-		RR42_RS34020	0.82	+0.3
3,063,792	+				-0.6
3,063,792	+				+0.4
3,063,793	-				-4.1
3,063,835	-				-3.1
3,064,040	-				-0.8
3,064,099	+				+1.4
3,064,100	-				+0.8
3,064,171	+				-1.4
3,064,172	-				-2.4
3,064,355	-		RR42_RS34025	0.12	-1.0
3,064,487	+		RR42_RS34025	0.35	-1.5
3,064,487	+		RR42_RS34025	0.35	-0.8
3,064,487	+		RR42_RS34025	0.35	+1.2
3,064,487	+		RR42_RS34025	0.35	-2.1
3,064,488	-		RR42_RS34025	0.35	+2.5
3,064,488	-		RR42_RS34025	0.35	+2.5
3,064,643	+		RR42_RS34025	0.63	+0.9
3,064,643	+		RR42_RS34025	0.63	+0.0
3,064,644	-		RR42_RS34025	0.63	-0.5
3,064,644	-		RR42_RS34025	0.63	-2.5
3,064,645	+		RR42_RS34025	0.63	-0.4
3,064,645	+		RR42_RS34025	0.63	+0.4
3,064,645	+		RR42_RS34025	0.63	-1.7
3,064,645	+		RR42_RS34025	0.63	-0.5
3,064,646	-		RR42_RS34025	0.63	-0.0
3,064,646	-		RR42_RS34025	0.63	-2.8