Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS34000

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,055,898	-		RR42_RS33995	0.41	-2.6
3,055,898	-		RR42_RS33995	0.41	-5.4
3,055,909	+		RR42_RS33995	0.42	-0.6
3,055,909	+		RR42_RS33995	0.42	-1.5
3,055,909	+		RR42_RS33995	0.42	+0.9
3,055,910	-		RR42_RS33995	0.43	+2.5
3,055,910	-		RR42_RS33995	0.43	-2.9
3,055,911	+		RR42_RS33995	0.43	-0.2
3,055,911	+		RR42_RS33995	0.43	-1.8
3,055,911	+		RR42_RS33995	0.43	-0.3
3,055,912	-		RR42_RS33995	0.43	-1.4
3,055,912	-		RR42_RS33995	0.43	+0.0
3,055,912	-		RR42_RS33995	0.43	-0.4
3,055,912	-		RR42_RS33995	0.43	-0.8
3,055,945	+		RR42_RS33995	0.46	-3.5
3,055,945	+		RR42_RS33995	0.46	+0.6
3,055,945	+		RR42_RS33995	0.46	+0.1
3,055,946	-		RR42_RS33995	0.47	+0.8
3,056,009	-		RR42_RS33995	0.53	+1.9
3,056,009	-		RR42_RS33995	0.53	-0.1
3,056,019	+		RR42_RS33995	0.55	-3.6
3,056,019	+		RR42_RS33995	0.55	-1.8
3,056,075	+		RR42_RS33995	0.61	+0.8
3,056,076	-		RR42_RS33995	0.61	-3.0
3,056,087	+		RR42_RS33995	0.62	+1.1
3,056,132	+		RR42_RS33995	0.67	+0.4
3,056,132	+		RR42_RS33995	0.67	+1.1
3,056,132	+		RR42_RS33995	0.67	+0.9
3,056,136	+		RR42_RS33995	0.68	+0.7
3,056,136	+		RR42_RS33995	0.68	+0.7
3,056,137	-		RR42_RS33995	0.68	-0.1
3,056,137	-		RR42_RS33995	0.68	+1.1
3,056,217	+		RR42_RS33995	0.77	+1.3
3,056,218	-		RR42_RS33995	0.77	+1.0
3,056,218	-		RR42_RS33995	0.77	+0.8
3,056,218	-		RR42_RS33995	0.77	-3.7
3,056,218	-		RR42_RS33995	0.77	+0.5
3,056,218	-		RR42_RS33995	0.77	+0.1
3,056,304	+		RR42_RS33995	0.86	+0.7
3,056,304	+		RR42_RS33995	0.86	-0.6
3,056,305	-		RR42_RS33995	0.86	-3.5
3,056,330	+		RR42_RS33995	0.89	-2.0
3,056,331	-		RR42_RS33995	0.89	-1.2
3,056,331	-		RR42_RS33995	0.89	-1.5
3,056,445	-				-2.6
3,056,503	-				+0.9
3,056,537	-				-0.9
3,056,631	+				+0.6
3,056,632	-				+1.1
3,056,641	+				-3.8
3,056,642	-				+1.6
3,056,662	-				-3.1
3,056,662	-				-0.1
3,056,689	+				-2.5
3,056,690	-				+1.4
3,056,742	+				-2.7
3,056,850	+				-3.8
3,056,850	+				+2.4
3,056,851	-				+0.1
3,056,851	-				+1.9
3,056,851	-				+0.1
3,056,851	-				+1.7
3,056,942	+		RR42_RS34000	0.16	+0.2
3,057,057	+		RR42_RS34000	0.43	-3.1
3,057,057	+		RR42_RS34000	0.43	-2.3
3,057,057	+		RR42_RS34000	0.43	+1.7
3,057,140	+		RR42_RS34000	0.62	+1.1
3,057,140	+		RR42_RS34000	0.62	+0.4
3,057,143	+		RR42_RS34000	0.63	-0.2
3,057,143	+		RR42_RS34000	0.63	-1.9
3,057,143	+		RR42_RS34000	0.63	+0.6
3,057,143	+		RR42_RS34000	0.63	-0.2
3,057,143	+		RR42_RS34000	0.63	-1.4
3,057,144	-		RR42_RS34000	0.63	+0.5
3,057,231	+		RR42_RS34000	0.83	-3.7
3,057,232	-		RR42_RS34000	0.84	-3.2
3,057,301	+				-4.0
3,057,301	+				+1.2
3,057,301	+				+0.9
3,057,301	+				+0.9
3,057,301	+				-3.9
3,057,302	-				+0.9
3,057,302	-				-0.1
3,057,302	-				-0.4
3,057,302	-				-4.1
3,057,302	-				+2.1
3,057,302	-				+1.0
3,057,429	+				-3.1
3,057,429	+				-1.8
3,057,429	+				-0.4
3,057,429	+				-0.2
3,057,430	-				+1.4
3,057,430	-				-4.2
3,057,430	-				-2.9
3,057,430	-				-2.6
3,057,461	+				-2.4
3,057,462	-				+1.0
3,057,462	-				+1.5
3,057,462	-				-3.4
3,057,462	-				-0.7
3,057,462	-				-1.3
3,057,497	+				+0.7
3,057,497	+				+2.3
3,057,497	+				+1.3
3,057,498	-				-1.7
3,057,498	-				-0.1
3,057,498	-				-2.8
3,057,498	-				-2.4
3,057,498	-				-4.0
3,057,498	-				+2.1
3,057,602	-				+0.9
3,057,732	+				+0.2
3,057,764	+				-3.4
3,057,765	-				-3.4
3,057,765	-				-2.8
3,057,789	-				-0.8
3,057,812	+				-0.6
3,057,828	+				-0.1
3,057,828	+				-0.6
3,057,829	-				-0.4
3,057,829	-				+2.2
3,057,829	-				+1.0
3,057,930	+				+1.3
3,057,930	+				-1.7
3,057,931	-				-4.0
3,057,931	-				+0.9
3,057,931	-				-2.6
3,057,931	-				+0.8
3,057,931	-				-2.3
3,058,011	+				+0.1
3,058,028	+				+1.1
3,058,028	+				-2.1
3,058,029	-				-2.4
3,058,098	+				+0.2
3,058,099	-				+1.7
3,058,099	-				+1.0
3,058,125	+				+1.4
3,058,126	-				+0.7
3,058,151	+				-1.3
3,058,157	+				-1.4
3,058,157	+				-2.9
3,058,157	+				+1.3
3,058,157	+				+0.4
3,058,157	+				+0.6
3,058,158	-				+2.1
3,058,160	+				-1.1
3,058,172	+				+0.2
3,058,173	-				-0.1
3,058,173	-				-3.3
3,058,176	-				+0.2
3,058,176	-				-0.5
3,058,176	-				-0.3
3,058,203	-				+0.4
3,058,205	+				-1.1
3,058,216	-				+0.5
3,058,238	+				-4.1
3,058,238	+				+0.6
3,058,266	+				-0.0