Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33710

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,989,110	-		RR42_RS33705	0.17	+1.4
2,989,159	+		RR42_RS33705	0.23	-3.3
2,989,159	+		RR42_RS33705	0.23	+0.7
2,989,159	+		RR42_RS33705	0.23	+0.4
2,989,159	+		RR42_RS33705	0.23	-1.0
2,989,159	+		RR42_RS33705	0.23	-3.0
2,989,160	-		RR42_RS33705	0.23	-0.5
2,989,160	-		RR42_RS33705	0.23	+1.4
2,989,160	-		RR42_RS33705	0.23	-1.7
2,989,160	-		RR42_RS33705	0.23	-0.6
2,989,160	-		RR42_RS33705	0.23	-0.1
2,989,238	+		RR42_RS33705	0.32	-2.7
2,989,238	+		RR42_RS33705	0.32	-1.2
2,989,239	-		RR42_RS33705	0.32	+0.8
2,989,332	+		RR42_RS33705	0.42	-1.1
2,989,375	+		RR42_RS33705	0.47	+3.3
2,989,375	+		RR42_RS33705	0.47	-1.8
2,989,375	+		RR42_RS33705	0.47	-2.7
2,989,375	+		RR42_RS33705	0.47	+0.6
2,989,389	-		RR42_RS33705	0.49	-1.2
2,989,399	+		RR42_RS33705	0.50	-2.5
2,989,471	+		RR42_RS33705	0.58	+0.6
2,989,491	-		RR42_RS33705	0.60	-0.5
2,989,624	+		RR42_RS33705	0.75	-1.0
2,989,624	+		RR42_RS33705	0.75	-1.1
2,989,624	+		RR42_RS33705	0.75	+0.7
2,989,625	-		RR42_RS33705	0.76	-2.4
2,989,625	-		RR42_RS33705	0.76	+0.5
2,989,625	-		RR42_RS33705	0.76	-4.0
2,989,625	-		RR42_RS33705	0.76	-3.2
2,989,735	+		RR42_RS33705	0.88	-0.2
2,989,735	+		RR42_RS33705	0.88	-2.5
2,989,736	-		RR42_RS33705	0.88	-0.2
2,989,838	-				+0.6
2,989,940	+				+2.2
2,989,940	+				+0.4
2,990,253	+		RR42_RS33710	0.31	-1.1
2,990,291	+		RR42_RS33710	0.36	-3.1
2,990,292	-		RR42_RS33710	0.36	-3.9
2,990,292	-		RR42_RS33710	0.36	-0.2
2,990,370	+		RR42_RS33710	0.47	+1.5
2,990,371	-		RR42_RS33710	0.47	+0.7
2,990,371	-		RR42_RS33710	0.47	-1.4
2,990,504	-		RR42_RS33710	0.65	-3.9
2,990,504	-		RR42_RS33710	0.65	-1.6
2,990,504	-		RR42_RS33710	0.65	-3.8
2,990,719	-				+1.3
2,990,719	-				+1.0
2,990,802	+				+1.1
2,990,859	+				-0.2
2,990,860	-				-0.8
2,990,938	+				-0.3
2,990,939	-				-1.5
2,990,950	+				-2.7
2,990,951	-				+1.2
2,990,982	+		RR42_RS33715	0.10	-1.0
2,991,054	+		RR42_RS33715	0.16	+1.3
2,991,087	+		RR42_RS33715	0.18	+0.7
2,991,219	+		RR42_RS33715	0.28	-0.5
2,991,279	+		RR42_RS33715	0.33	+0.2
2,991,279	+		RR42_RS33715	0.33	-0.5
2,991,279	+		RR42_RS33715	0.33	+0.7
2,991,280	-		RR42_RS33715	0.33	+0.4
2,991,280	-		RR42_RS33715	0.33	+0.8
2,991,280	-		RR42_RS33715	0.33	-1.4
2,991,280	-		RR42_RS33715	0.33	+0.4
2,991,280	-		RR42_RS33715	0.33	-3.0
2,991,289	-		RR42_RS33715	0.33	+0.6
2,991,666	+		RR42_RS33715	0.62	-0.4
2,991,666	+		RR42_RS33715	0.62	+1.5
2,991,667	-		RR42_RS33715	0.62	-3.5
2,991,753	+		RR42_RS33715	0.68	-1.4
2,991,753	+		RR42_RS33715	0.68	+0.3
2,991,754	-		RR42_RS33715	0.68	+0.5