Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33700

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,987,651	+				-1.3
2,987,782	+				-0.0
2,987,782	+				-0.5
2,987,783	-				+0.1
2,987,783	-				-0.2
2,988,010	+		RR42_RS33695	0.36	+1.0
2,988,011	-		RR42_RS33695	0.36	-1.5
2,988,011	-		RR42_RS33695	0.36	-2.1
2,988,068	-		RR42_RS33695	0.44	-0.5
2,988,435	-				-0.4
2,988,455	-				-2.6
2,988,500	-				-1.0
2,988,500	-				+0.8
2,988,549	+				-2.2
2,988,568	+				-3.8
2,988,570	+				+2.4
2,988,570	+				-4.4
2,988,571	-				+2.0
2,988,613	-		RR42_RS33700	0.34	-1.9
2,988,675	+				+0.7
2,988,708	+				+0.9
2,988,709	-				-2.9
2,988,817	-				-2.3
2,988,817	-				+0.4
2,988,817	-				+1.7
2,988,821	+				-1.7
2,988,821	+				-1.6
2,988,821	+				+1.2
2,988,822	-				-0.6
2,988,822	-				-0.1
2,988,822	-				-0.0
2,988,833	-				+1.1
2,988,934	-				+0.9
2,988,940	-				+2.1
2,989,110	-		RR42_RS33705	0.17	+1.4
2,989,159	+		RR42_RS33705	0.23	-3.3
2,989,159	+		RR42_RS33705	0.23	+0.7
2,989,159	+		RR42_RS33705	0.23	+0.4
2,989,159	+		RR42_RS33705	0.23	-1.0
2,989,159	+		RR42_RS33705	0.23	-3.0
2,989,160	-		RR42_RS33705	0.23	-0.5
2,989,160	-		RR42_RS33705	0.23	+1.4
2,989,160	-		RR42_RS33705	0.23	-1.7
2,989,160	-		RR42_RS33705	0.23	-0.6
2,989,160	-		RR42_RS33705	0.23	-0.1
2,989,238	+		RR42_RS33705	0.32	-2.7
2,989,238	+		RR42_RS33705	0.32	-1.2
2,989,239	-		RR42_RS33705	0.32	+0.8
2,989,332	+		RR42_RS33705	0.42	-1.1
2,989,375	+		RR42_RS33705	0.47	+3.3
2,989,375	+		RR42_RS33705	0.47	-1.8
2,989,375	+		RR42_RS33705	0.47	-2.7
2,989,375	+		RR42_RS33705	0.47	+0.6
2,989,389	-		RR42_RS33705	0.49	-1.2
2,989,399	+		RR42_RS33705	0.50	-2.5
2,989,471	+		RR42_RS33705	0.58	+0.6
2,989,491	-		RR42_RS33705	0.60	-0.5
2,989,624	+		RR42_RS33705	0.75	-1.0
2,989,624	+		RR42_RS33705	0.75	-1.1
2,989,624	+		RR42_RS33705	0.75	+0.7
2,989,625	-		RR42_RS33705	0.76	-2.4
2,989,625	-		RR42_RS33705	0.76	+0.5
2,989,625	-		RR42_RS33705	0.76	-4.0
2,989,625	-		RR42_RS33705	0.76	-3.2