Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33575

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,960,299	+				+1.9
2,960,299	+				-2.3
2,960,300	-				+0.6
2,960,419	+				-0.3
2,960,420	-				+1.4
2,960,420	-				-0.3
2,960,420	-				-1.0
2,960,420	-				-3.7
2,960,420	-				-2.0
2,960,431	-				-0.5
2,960,431	-				-0.8
2,960,431	-				+1.2
2,960,467	+				-1.6
2,960,468	-				+0.7
2,960,468	-				+0.6
2,960,497	+				-2.0
2,960,497	+				-2.5
2,960,561	+				+0.3
2,960,562	-				-2.2
2,960,562	-				-2.6
2,960,619	+				+1.0
2,960,642	+				-2.7
2,960,643	-				-0.3
2,960,643	-				+0.7
2,960,643	-				+0.9
2,960,643	-				-0.6
2,960,657	+				+0.4
2,960,786	+				-4.0
2,960,786	+				+2.1
2,960,786	+				-0.2
2,960,786	+				+0.7
2,960,787	-				-1.2
2,960,787	-				-0.1
2,960,787	-				+0.6
2,960,787	-				+2.7
2,960,787	-				-0.0
2,961,044	+				+1.3
2,961,044	+				-1.4
2,961,044	+				+2.5
2,961,045	-				+0.1
2,961,045	-				+2.1
2,961,046	+				+2.4
2,961,047	-				-2.9
2,961,047	-				-2.6
2,961,122	-				-1.1
2,961,182	+				-3.4
2,961,182	+				+1.1
2,961,540	-		RR42_RS33575	0.35	-0.4
2,961,679	+		RR42_RS33575	0.51	-1.6
2,961,680	-		RR42_RS33575	0.51	+0.1
2,961,834	-		RR42_RS33575	0.70	-0.0
2,962,122	-				-2.4
2,962,122	-				+1.0
2,962,129	-				+0.3
2,962,129	-				+2.0
2,962,137	+				+2.8
2,962,137	+				+2.3
2,962,138	-				-1.5
2,962,164	-				-0.6
2,962,179	+				-1.1
2,962,230	+		RR42_RS33580	0.10	+0.7
2,962,231	-		RR42_RS33580	0.10	+0.6
2,962,231	-		RR42_RS33580	0.10	-0.6
2,962,231	-		RR42_RS33580	0.10	+0.3
2,962,288	+		RR42_RS33580	0.17	-0.6
2,962,289	-		RR42_RS33580	0.17	+1.7
2,962,309	+		RR42_RS33580	0.19	-0.6
2,962,310	-		RR42_RS33580	0.19	-0.9
2,962,541	+		RR42_RS33580	0.44	-1.1
2,962,715	+		RR42_RS33580	0.63	+0.3
2,962,715	+		RR42_RS33580	0.63	+0.8
2,962,755	-		RR42_RS33580	0.68	-3.6
2,962,839	-		RR42_RS33580	0.77	-0.4
2,962,997	+				-0.5
2,962,997	+				-3.4
2,963,044	+				-1.6
2,963,044	+				-2.7
2,963,044	+				+1.6
2,963,044	+				+2.0
2,963,044	+				-1.9
2,963,044	+				-2.7
2,963,044	+				+0.2
2,963,045	-				+1.3
2,963,045	-				+0.3
2,963,045	-				+0.3
2,963,045	-				-0.8
2,963,045	-				+0.3
2,963,045	-				-3.3
2,963,045	-				+0.2