Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS33275

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,879,590	+		RR42_RS33265	0.87	-0.1
2,879,590	+		RR42_RS33265	0.87	-1.8
2,879,590	+		RR42_RS33265	0.87	-0.2
2,879,752	+				+1.0
2,879,826	-				+1.1
2,879,826	-				+0.8
2,879,859	+				+1.0
2,879,907	-				-3.2
2,879,913	+				-0.5
2,879,914	-				+2.4
2,880,102	+		RR42_RS33270	0.15	-2.7
2,880,188	+		RR42_RS33270	0.33	-2.0
2,880,188	+		RR42_RS33270	0.33	+1.5
2,880,188	+		RR42_RS33270	0.33	-0.9
2,880,464	+				-0.9
2,880,464	+				-3.5
2,880,465	-				+0.5
2,880,515	+				-0.4
2,880,516	-				-0.1
2,880,516	-				-3.5
2,880,516	-				+2.5
2,880,641	+		RR42_RS33275	0.20	-1.4
2,880,642	-		RR42_RS33275	0.20	-0.7
2,880,642	-		RR42_RS33275	0.20	-1.4
2,880,642	-		RR42_RS33275	0.20	-2.0
2,880,642	-		RR42_RS33275	0.20	+2.1
2,880,747	-		RR42_RS33275	0.56	-0.2
2,880,753	+		RR42_RS33275	0.58	+0.5
2,880,753	+		RR42_RS33275	0.58	+1.1
2,880,753	+		RR42_RS33275	0.58	-0.3
2,880,754	-		RR42_RS33275	0.58	-3.5
2,880,754	-		RR42_RS33275	0.58	-1.3
2,880,754	-		RR42_RS33275	0.58	-1.8
2,880,754	-		RR42_RS33275	0.58	-0.3
2,880,805	+		RR42_RS33275	0.76	+0.3
2,880,806	-		RR42_RS33275	0.76	+0.6
2,880,904	+				+0.9
2,880,923	+				-2.4
2,880,984	+				-0.2
2,880,984	+				-2.6
2,880,984	+				-2.5
2,880,985	-				+1.3
2,880,985	-				-0.4
2,881,078	+				-2.0
2,881,078	+				+1.4
2,881,079	-				-1.6
2,881,080	+				+0.8
2,881,080	+				-3.2
2,881,081	-				+0.3
2,881,088	+				+0.3
2,881,088	+				+0.3
2,881,088	+				+0.8
2,881,088	+				+0.3
2,881,088	+				+0.7
2,881,089	-				-1.0
2,881,089	-				+0.4
2,881,089	-				-0.6
2,881,089	-				-0.3
2,881,089	-				+1.6
2,881,089	-				-3.9
2,881,113	-				-1.1
2,881,240	+				-2.3
2,881,240	+				+1.7
2,881,241	-				-0.5
2,881,362	-				-0.7
2,881,362	-				+0.6
2,881,365	-				+1.9
2,881,429	+				+0.7
2,881,544	+		RR42_RS33280	0.20	+0.0
2,881,613	+		RR42_RS33280	0.26	+1.3
2,881,614	-		RR42_RS33280	0.26	+2.1
2,881,614	-		RR42_RS33280	0.26	-2.6
2,881,634	+		RR42_RS33280	0.28	-0.5
2,881,634	+		RR42_RS33280	0.28	+0.8
2,881,634	+		RR42_RS33280	0.28	+1.2
2,881,634	+		RR42_RS33280	0.28	-2.6
2,881,634	+		RR42_RS33280	0.28	+1.3
2,881,635	-		RR42_RS33280	0.28	+1.3
2,881,635	-		RR42_RS33280	0.28	+1.3
2,881,635	-		RR42_RS33280	0.28	-1.2
2,881,635	-		RR42_RS33280	0.28	-2.0
2,881,635	-		RR42_RS33280	0.28	-0.3
2,881,635	-		RR42_RS33280	0.28	-0.7
2,881,635	-		RR42_RS33280	0.28	+1.5
2,881,679	+		RR42_RS33280	0.32	-2.6
2,881,679	+		RR42_RS33280	0.32	+0.3
2,881,679	+		RR42_RS33280	0.32	-1.4
2,881,680	-		RR42_RS33280	0.32	-2.3
2,881,680	-		RR42_RS33280	0.32	+0.4
2,881,733	+		RR42_RS33280	0.37	+2.2
2,881,733	+		RR42_RS33280	0.37	-0.5
2,881,733	+		RR42_RS33280	0.37	-3.4
2,881,733	+		RR42_RS33280	0.37	-2.7
2,881,734	-		RR42_RS33280	0.37	+0.0
2,881,734	-		RR42_RS33280	0.37	-3.9
2,881,734	-		RR42_RS33280	0.37	-1.8
2,881,734	-		RR42_RS33280	0.37	+0.9
2,881,734	-		RR42_RS33280	0.37	+0.4
2,881,734	-		RR42_RS33280	0.37	-0.2
2,881,856	+		RR42_RS33280	0.48	+0.4
2,881,856	+		RR42_RS33280	0.48	-1.3
2,881,857	-		RR42_RS33280	0.48	+0.6