Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32575

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,703,519	+				+0.4
2,703,550	-				-0.4
2,703,637	-				+0.6
2,703,849	+		RR42_RS32570	0.32	-1.6
2,703,936	+		RR42_RS32570	0.41	+1.5
2,703,936	+		RR42_RS32570	0.41	-1.4
2,703,937	-		RR42_RS32570	0.41	-3.1
2,704,011	+		RR42_RS32570	0.49	-0.4
2,704,012	-		RR42_RS32570	0.49	-0.4
2,704,012	-		RR42_RS32570	0.49	-0.2
2,704,089	+		RR42_RS32570	0.57	+1.8
2,704,090	-		RR42_RS32570	0.57	-1.7
2,704,384	+		RR42_RS32570	0.88	-0.4
2,704,737	-		RR42_RS32575	0.23	+0.5
2,704,814	+		RR42_RS32575	0.31	+0.8
2,704,971	+		RR42_RS32575	0.46	+1.7
2,704,972	-		RR42_RS32575	0.46	-2.9
2,704,972	-		RR42_RS32575	0.46	+1.1
2,705,062	+		RR42_RS32575	0.54	-3.1
2,705,063	+		RR42_RS32575	0.55	+0.4
2,705,063	+		RR42_RS32575	0.55	-1.6
2,705,063	+		RR42_RS32575	0.55	-2.9
2,705,063	+		RR42_RS32575	0.55	+0.3
2,705,063	+		RR42_RS32575	0.55	-0.1
2,705,063	+		RR42_RS32575	0.55	+0.2
2,705,064	-		RR42_RS32575	0.55	-0.1
2,705,064	-		RR42_RS32575	0.55	-3.0
2,705,064	-		RR42_RS32575	0.55	-0.7
2,705,064	-		RR42_RS32575	0.55	-0.1
2,705,123	+		RR42_RS32575	0.60	-3.4
2,705,123	+		RR42_RS32575	0.60	+0.0
2,705,123	+		RR42_RS32575	0.60	+0.9
2,705,123	+		RR42_RS32575	0.60	+2.0
2,705,124	-		RR42_RS32575	0.60	+0.1
2,705,124	-		RR42_RS32575	0.60	-0.2
2,705,124	-		RR42_RS32575	0.60	-3.5
2,705,126	+		RR42_RS32575	0.61	-0.7
2,705,235	-		RR42_RS32575	0.71	-3.8
2,705,516	+				-1.9
2,705,517	-				+0.9
2,705,517	-				+1.3
2,705,517	-				-0.3
2,705,517	-				-3.1
2,705,517	-				+0.6
2,705,538	+				+0.4
2,705,584	+				+1.4
2,705,584	+				+0.3
2,705,585	-				-2.2
2,705,597	+				+0.9
2,705,598	-				-0.7
2,705,861	+		RR42_RS32580	0.33	-2.8
2,705,950	+		RR42_RS32580	0.45	-2.4
2,705,951	-		RR42_RS32580	0.45	+0.4
2,705,951	-		RR42_RS32580	0.45	-0.7
2,705,951	-		RR42_RS32580	0.45	+1.0
2,706,254	+		RR42_RS32580	0.83	+0.2
2,706,254	+		RR42_RS32580	0.83	-3.1
2,706,254	+		RR42_RS32580	0.83	+1.3
2,706,397	+				+1.0
2,706,398	-				+1.2
2,706,398	-				+0.4