Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS32430

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,672,019	-		RR42_RS32425	0.37	+0.7
2,672,092	-		RR42_RS32425	0.42	+0.3
2,672,575	-		RR42_RS32425	0.74	-3.9
2,672,601	-		RR42_RS32425	0.76	+1.7
2,672,601	-		RR42_RS32425	0.76	+0.7
2,672,759	+		RR42_RS32425	0.86	-0.6
2,672,759	+		RR42_RS32425	0.86	+0.1
2,672,759	+		RR42_RS32425	0.86	+0.4
2,672,760	-		RR42_RS32425	0.86	-2.6
2,672,760	-		RR42_RS32425	0.86	+0.8
2,672,760	-		RR42_RS32425	0.86	-0.1
2,672,760	-		RR42_RS32425	0.86	-0.5
2,672,792	+		RR42_RS32425	0.88	-0.5
2,672,793	-		RR42_RS32425	0.88	-1.5
2,672,793	-		RR42_RS32425	0.88	+2.7
2,673,028	-				-0.2
2,673,028	-				+0.2
2,673,029	+				+1.0
2,673,029	+				+0.0
2,673,029	+				-3.4
2,673,030	-				+1.5
2,673,209	+		RR42_RS32430	0.26	+1.0
2,673,279	-		RR42_RS32430	0.35	+1.9
2,673,538	+		RR42_RS32430	0.69	+1.0
2,673,538	+		RR42_RS32430	0.69	+0.5
2,673,722	+				-1.7
2,673,722	+				-2.3
2,673,722	+				-3.3
2,673,723	-				-0.9
2,673,723	-				-3.7
2,673,723	-				+0.4
2,673,726	+				-0.8
2,673,906	-				-0.1
2,673,906	-				-2.1
2,673,912	+				-0.5
2,673,913	-				-2.7
2,673,913	-				-0.9
2,673,913	-				+0.4
2,673,913	-				-0.4
2,673,986	+		RR42_RS32435	0.12	+1.2
2,673,986	+		RR42_RS32435	0.12	-3.3
2,674,074	+		RR42_RS32435	0.21	+0.6
2,674,237	-		RR42_RS32435	0.38	+1.0
2,674,237	-		RR42_RS32435	0.38	+1.6
2,674,260	+		RR42_RS32435	0.40	+1.1
2,674,260	+		RR42_RS32435	0.40	-3.2
2,674,261	-		RR42_RS32435	0.40	-2.1
2,674,261	-		RR42_RS32435	0.40	-1.2
2,674,440	+		RR42_RS32435	0.59	+0.2
2,674,441	-		RR42_RS32435	0.59	+0.9
2,674,608	+		RR42_RS32435	0.76	+0.5
2,674,608	+		RR42_RS32435	0.76	+0.3
2,674,609	-		RR42_RS32435	0.77	+0.1