Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31725

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,493,754	-				-0.2
2,493,798	+				+0.7
2,493,799	-				+1.0
2,493,799	-				+0.5
2,493,799	-				-4.2
2,493,814	-				+0.1
2,493,814	-				+0.3
2,493,822	+				-0.2
2,493,822	+				-2.3
2,494,023	+				+1.3
2,494,023	+				+1.8
2,494,234	+				+0.5
2,494,369	-				+1.3
2,494,370	+				-1.3
2,494,425	+				+2.2
2,494,755	+				+0.1
2,494,945	-		RR42_RS31725	0.16	+0.0
2,494,945	-		RR42_RS31725	0.16	+1.3
2,494,971	+		RR42_RS31725	0.18	-1.8
2,494,972	-		RR42_RS31725	0.19	-2.0
2,495,355	+		RR42_RS31725	0.48	-0.8
2,495,355	+		RR42_RS31725	0.48	-0.0
2,495,355	+		RR42_RS31725	0.48	+0.7
2,495,356	-		RR42_RS31725	0.48	-1.7
2,495,356	-		RR42_RS31725	0.48	-0.3
2,495,356	-		RR42_RS31725	0.48	-3.9
2,495,356	-		RR42_RS31725	0.48	-4.1
2,495,559	-		RR42_RS31725	0.64	-0.5
2,495,559	-		RR42_RS31725	0.64	+1.1
2,495,565	+		RR42_RS31725	0.64	+1.5
2,495,583	+		RR42_RS31725	0.65	+0.8
2,495,719	-		RR42_RS31725	0.76	-0.5
2,495,754	+		RR42_RS31725	0.79	+0.1
2,495,755	-		RR42_RS31725	0.79	+0.7
2,495,851	-		RR42_RS31725	0.86	+0.6
2,496,030	+				-0.7
2,496,030	+				-0.2
2,496,135	+				-1.2
2,496,147	+				+0.7
2,496,148	-				+1.5
2,496,148	-				+0.5
2,496,148	-				-0.2
2,496,212	+		RR42_RS31730	0.15	-3.2
2,496,297	+		RR42_RS31730	0.24	+1.0
2,496,297	+		RR42_RS31730	0.24	-1.7
2,496,297	+		RR42_RS31730	0.24	-0.2
2,496,298	-		RR42_RS31730	0.24	-1.2
2,496,298	-		RR42_RS31730	0.24	-4.3
2,496,344	-		RR42_RS31730	0.29	+0.5
2,496,384	+		RR42_RS31730	0.33	-4.8
2,496,384	+		RR42_RS31730	0.33	+1.1
2,496,384	+				+0.8
2,496,385	-		RR42_RS31730	0.33	-0.1
2,496,427	+		RR42_RS31730	0.37	+0.1
2,496,444	-		RR42_RS31730	0.39	+1.0
2,496,459	+		RR42_RS31730	0.41	-1.6
2,496,459	+		RR42_RS31730	0.41	+0.1
2,496,459	+		RR42_RS31730	0.41	-1.5
2,496,459	+		RR42_RS31730	0.41	+0.3
2,496,460	-		RR42_RS31730	0.41	+3.7
2,496,460	-		RR42_RS31730	0.41	+0.8
2,496,765	+		RR42_RS31730	0.73	+0.2
2,496,766	-		RR42_RS31730	0.73	+1.0