Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS31115

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,359,741	-		RR42_RS31110	0.24	+1.4
2,359,741	-		RR42_RS31110	0.24	+1.1
2,359,934	+		RR42_RS31110	0.43	-0.4
2,359,934	+		RR42_RS31110	0.43	-4.6
2,359,934	+		RR42_RS31110	0.43	-4.2
2,359,934	+		RR42_RS31110	0.43	-0.8
2,359,935	-		RR42_RS31110	0.44	-0.2
2,359,935	-		RR42_RS31110	0.44	+0.0
2,360,150	+		RR42_RS31110	0.66	-3.6
2,360,150	+		RR42_RS31110	0.66	-2.6
2,360,150	+		RR42_RS31110	0.66	+0.6
2,360,399	+				-0.8
2,360,530	+				+2.0
2,360,530	+				+0.2
2,360,530	+				+0.9
2,360,588	+				+0.4
2,360,609	+				+0.6
2,360,609	+				+1.5
2,360,610	-				-1.3
2,360,610	-				+0.5
2,360,610	-				-0.1
2,360,699	+		RR42_RS31115	0.11	+0.1
2,360,699	+		RR42_RS31115	0.11	+1.0
2,360,699	+		RR42_RS31115	0.11	-3.5
2,360,700	-		RR42_RS31115	0.12	-1.3
2,360,700	-		RR42_RS31115	0.12	-3.4
2,361,248	+		RR42_RS31115	0.68	-0.6
2,361,248	+		RR42_RS31115	0.68	+1.8
2,361,249	-		RR42_RS31115	0.68	+0.5
2,361,249	-		RR42_RS31115	0.68	+1.5
2,361,297	+		RR42_RS31115	0.73	+0.8
2,361,297	+		RR42_RS31115	0.73	-0.5
2,361,297	+		RR42_RS31115	0.73	+0.6
2,361,297	+		RR42_RS31115	0.73	+0.9
2,361,298	-		RR42_RS31115	0.73	+1.3
2,361,298	-		RR42_RS31115	0.73	-0.2
2,361,482	+				-1.6
2,361,575	+				+0.2
2,361,707	+		RR42_RS31120	0.12	+0.7
2,361,707	+		RR42_RS31120	0.12	+0.5
2,361,707	+		RR42_RS31120	0.12	-1.3
2,361,708	-		RR42_RS31120	0.13	+0.2
2,361,708	-		RR42_RS31120	0.13	-1.1
2,361,848	+		RR42_RS31120	0.48	+0.7
2,361,848	+		RR42_RS31120	0.48	-0.9
2,361,848	+		RR42_RS31120	0.48	-3.0
2,361,848	+		RR42_RS31120	0.48	-4.7
2,361,849	-		RR42_RS31120	0.48	-2.7
2,361,849	-		RR42_RS31120	0.48	+1.1
2,361,849	-		RR42_RS31120	0.48	-1.5
2,361,849	-		RR42_RS31120	0.48	-2.7
2,361,849	-		RR42_RS31120	0.48	-3.9
2,361,849	-		RR42_RS31120	0.48	-1.0
2,361,849	-		RR42_RS31120	0.48	-0.5
2,361,849	-		RR42_RS31120	0.48	-4.5
2,361,849	-		RR42_RS31120	0.48	+1.0
2,362,028	+				+3.1
2,362,028	+				-0.2
2,362,029	-				-3.2
2,362,029	-				+0.5
2,362,029	-				-3.3
2,362,029	-				-1.2
2,362,180	-				-0.2
2,362,210	+				-0.3
2,362,210	+				+0.6
2,362,211	-				+0.6
2,362,211	-				-1.7
2,362,222	+				+1.6
2,362,284	+				+1.0
2,362,285	-				+0.2
2,362,285	-				-1.7
2,362,285	-				+0.7
2,362,332	+				-0.1
2,362,332	+				-0.6
2,362,333	-				-2.9
2,362,333	-				+0.2
2,362,351	+				-2.3
2,362,351	+				-3.6
2,362,351	+				+0.1
2,362,352	-				+0.7