Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30385

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,189,462	-		RR42_RS30375	0.80	-0.6
2,189,527	+		RR42_RS30375	0.85	+0.9
2,189,528	-		RR42_RS30375	0.85	+0.8
2,189,528	-		RR42_RS30375	0.85	-0.8
2,189,566	+		RR42_RS30375	0.88	+0.6
2,189,567	-		RR42_RS30375	0.88	+1.0
2,189,567	-		RR42_RS30375	0.88	-0.3
2,189,603	+				-0.2
2,189,604	-				+0.4
2,189,604	-				-4.0
2,189,604	-				+1.1
2,189,607	+				-1.7
2,189,757	-		RR42_RS30380	0.10	+0.5
2,189,836	-		RR42_RS30380	0.22	-3.7
2,189,836	-		RR42_RS30380	0.22	+0.6
2,190,172	-		RR42_RS30380	0.74	+1.2
2,190,172	-		RR42_RS30380	0.74	-0.6
2,190,172	-		RR42_RS30380	0.74	-3.3
2,190,172	-		RR42_RS30380	0.74	+1.2
2,190,242	+		RR42_RS30380	0.84	+0.7
2,190,460	+				+1.1
2,190,460	+				-2.3
2,190,463	+				-2.7
2,190,464	-				-1.9
2,190,583	+		RR42_RS30385	0.11	-1.0
2,190,583	+		RR42_RS30385	0.11	+0.8
2,190,584	-		RR42_RS30385	0.11	-0.0
2,190,584	-		RR42_RS30385	0.11	+1.8
2,190,611	-		RR42_RS30385	0.14	+2.4
2,190,628	+		RR42_RS30385	0.15	+1.4
2,190,628	+		RR42_RS30385	0.15	-3.0
2,190,628	+		RR42_RS30385	0.15	-1.1
2,190,628	+		RR42_RS30385	0.15	-0.0
2,190,629	-		RR42_RS30385	0.16	-0.8
2,190,629	-		RR42_RS30385	0.16	-1.7
2,190,629	-		RR42_RS30385	0.16	+0.4
2,190,667	+		RR42_RS30385	0.19	+2.3
2,190,670	+		RR42_RS30385	0.19	-0.3
2,190,671	-		RR42_RS30385	0.20	+0.3
2,190,707	+		RR42_RS30385	0.23	-0.5
2,190,708	-		RR42_RS30385	0.23	-1.5
2,190,708	-		RR42_RS30385	0.23	-2.6
2,190,708	-		RR42_RS30385	0.23	-0.3
2,190,708	-		RR42_RS30385	0.23	-2.0
2,190,710	-		RR42_RS30385	0.23	-1.3
2,190,710	-		RR42_RS30385	0.23	-3.5
2,190,784	+		RR42_RS30385	0.30	-3.7
2,190,818	-		RR42_RS30385	0.33	-0.5
2,190,889	+		RR42_RS30385	0.40	+0.5
2,190,890	-		RR42_RS30385	0.40	-0.2
2,190,995	+		RR42_RS30385	0.50	+0.1
2,191,013	-		RR42_RS30385	0.51	+1.1
2,191,156	+		RR42_RS30385	0.65	+0.4
2,191,156	+		RR42_RS30385	0.65	-3.1
2,191,156	+		RR42_RS30385	0.65	+1.5
2,191,157	-		RR42_RS30385	0.65	+3.3
2,191,157	-		RR42_RS30385	0.65	-0.3
2,191,216	+		RR42_RS30385	0.70	+0.1
2,191,216	+		RR42_RS30385	0.70	+0.9
2,191,216	+		RR42_RS30385	0.70	-1.9
2,191,217	-		RR42_RS30385	0.70	-1.3
2,191,307	+		RR42_RS30385	0.79	-0.4
2,191,307	+		RR42_RS30385	0.79	-3.5
2,191,308	-		RR42_RS30385	0.79	+0.8
2,191,311	-		RR42_RS30385	0.79	+2.0
2,191,642	-				+0.4
2,191,650	+				+1.7
2,191,650	+				+0.3
2,191,650	+				+1.4
2,191,650	+				-0.9
2,191,650	+				-0.2
2,191,650	+				+0.7
2,191,650	+				-1.5
2,191,650	+				-2.6
2,191,650	+				-1.6
2,191,650	+				+1.0
2,191,650	+				-2.2
2,191,651	-				+0.2
2,191,651	-				+0.2
2,191,651	-				-0.7
2,191,651	-				-2.2
2,191,651	-				+1.0
2,191,651	-				+0.5
2,191,651	-				-0.4
2,191,651	-				-1.7
2,191,651	-				-2.0
2,191,651	-				+0.2
2,191,651	-				+0.9
2,191,651	-				+0.3
2,191,664	-				+1.6
2,191,664	-				+0.4
2,191,668	-				-3.0
2,191,668	-				+0.4
2,191,671	+				-2.1
2,191,675	+				+1.1
2,191,685	-				-1.6
2,191,801	+				+0.4
2,191,845	-				-0.3
2,192,174	-				+0.9
2,192,174	-				+1.3
2,192,446	+		RR42_RS30390	0.15	+1.3
2,192,446	+		RR42_RS30390	0.15	-0.1
2,192,446	+		RR42_RS30390	0.15	+0.9
2,192,447	-		RR42_RS30390	0.15	+1.1
2,192,447	-		RR42_RS30390	0.15	+0.1
2,192,447	-		RR42_RS30390	0.15	-3.0
2,192,521	+		RR42_RS30390	0.18	-0.3
2,192,522	-		RR42_RS30390	0.18	-1.9