Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30210

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,151,870	-		RR42_RS30205	0.52	+1.5
2,152,149	+		RR42_RS30205	0.72	-1.8
2,152,149	+		RR42_RS30205	0.72	+0.7
2,152,149	+		RR42_RS30205	0.72	+0.0
2,152,150	-		RR42_RS30205	0.72	+1.6
2,152,150	-		RR42_RS30205	0.72	+0.6
2,152,429	-				+0.3
2,152,443	+				+3.3
2,152,567	+				+0.8
2,152,568	-				+1.4
2,152,568	-				+0.1
2,152,588	-				-0.6
2,152,707	+				+0.3
2,152,708	-				+1.0
2,152,708	-				+1.6
2,152,708	-				-4.0
2,152,708	-				-0.6
2,152,732	+				-1.1
2,152,738	+				-0.2
2,152,739	-				-3.3
2,152,740	+				-4.9
2,152,740	+				-2.4
2,152,741	-				-3.8
2,152,799	+				-3.7
2,152,848	+				-1.5
2,152,848	+				+0.3
2,152,849	-				-3.3
2,152,849	-				+0.9
2,152,849	-				-3.4
2,152,884	+		RR42_RS30210	0.13	-0.7
2,152,886	+		RR42_RS30210	0.13	+2.7
2,152,886	+		RR42_RS30210	0.13	-0.5
2,152,886	+		RR42_RS30210	0.13	+2.0
2,152,938	+		RR42_RS30210	0.19	+0.1
2,153,042	-		RR42_RS30210	0.31	-0.1
2,153,042	-		RR42_RS30210	0.31	+0.9
2,153,254	-		RR42_RS30210	0.55	+1.0
2,153,254	-		RR42_RS30210	0.55	+1.4
2,153,314	+		RR42_RS30210	0.62	+1.4
2,153,314	+		RR42_RS30210	0.62	-2.7
2,153,354	+		RR42_RS30210	0.66	-2.0
2,153,354	+		RR42_RS30210	0.66	+0.7
2,153,476	+		RR42_RS30210	0.80	+1.6
2,153,729	+				-1.7
2,153,730	-				-3.2
2,153,893	+				-1.7
2,153,893	+				+2.1
2,153,893	+				-2.2
2,153,897	+				+0.6
2,153,897	+				+0.8
2,153,897	+				+0.6
2,153,897	+				+0.2
2,153,898	-				+0.9
2,153,898	-				+1.6
2,153,900	+				+1.5
2,153,935	+				-1.2
2,153,936	-				-2.7
2,153,936	-				+1.5
2,154,070	-				-3.0
2,154,092	+				+0.2
2,154,093	-				-2.3
2,154,132	-				-0.9
2,154,217	+				-0.6
2,154,217	+				+0.3
2,154,232	+				+3.3
2,154,232	+				+0.0
2,154,250	+				-3.3
2,154,328	+		RR42_RS30215	0.15	+0.7
2,154,328	+		RR42_RS30215	0.15	+0.5
2,154,329	-		RR42_RS30215	0.15	-1.5
2,154,357	+		RR42_RS30215	0.17	-1.9
2,154,367	+		RR42_RS30215	0.18	-2.9
2,154,368	-		RR42_RS30215	0.18	-3.1
2,154,495	-		RR42_RS30215	0.28	+0.1
2,154,622	-		RR42_RS30215	0.38	-0.9
2,154,630	+		RR42_RS30215	0.38	+1.1
2,154,631	-		RR42_RS30215	0.39	-0.2