Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30200

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,149,568	+		RR42_RS30190	0.83	+0.1
2,149,568	+		RR42_RS30190	0.83	-1.7
2,149,641	+		RR42_RS30190	0.88	-3.0
2,149,641	+		RR42_RS30190	0.88	-0.1
2,149,894	+				+0.8
2,149,894	+				-2.3
2,149,894	+				+0.1
2,149,895	-				+3.1
2,149,895	-				-2.7
2,149,931	+				+0.7
2,149,931	+				-0.0
2,150,064	+		RR42_RS30195	0.29	+1.7
2,150,064	+		RR42_RS30195	0.29	-0.3
2,150,064	+		RR42_RS30195	0.29	-2.0
2,150,064	+		RR42_RS30195	0.29	+0.7
2,150,065	-		RR42_RS30195	0.29	+0.8
2,150,300	+		RR42_RS30195	0.80	+0.0
2,150,360	+				+1.2
2,150,361	-				-3.3
2,150,486	-				+0.3
2,150,508	+				+1.0
2,150,509	-				+0.5
2,150,630	-		RR42_RS30200	0.18	+0.4
2,150,665	+		RR42_RS30200	0.23	-1.3
2,150,665	+		RR42_RS30200	0.23	-1.5
2,150,666	-		RR42_RS30200	0.23	-0.9
2,150,766	+		RR42_RS30200	0.39	+0.8
2,150,766	+		RR42_RS30200	0.39	+1.7
2,150,767	-		RR42_RS30200	0.40	+0.9
2,151,073	+		RR42_RS30200	0.89	-2.9
2,151,074	-		RR42_RS30200	0.89	-0.0
2,151,074	-		RR42_RS30200	0.89	+0.7
2,151,074	-		RR42_RS30200	0.89	-0.3
2,151,147	+				+0.1
2,151,627	-		RR42_RS30205	0.35	+1.5
2,151,655	-		RR42_RS30205	0.37	-3.3
2,151,658	-		RR42_RS30205	0.37	-0.5
2,151,744	+		RR42_RS30205	0.43	-1.9
2,151,744	+		RR42_RS30205	0.43	-1.0
2,151,744	+		RR42_RS30205	0.43	-1.4
2,151,744	+		RR42_RS30205	0.43	+0.4
2,151,744	+		RR42_RS30205	0.43	-0.5
2,151,744	+		RR42_RS30205	0.43	+0.1
2,151,745	-		RR42_RS30205	0.43	+1.3
2,151,745	-		RR42_RS30205	0.43	-0.4
2,151,745	-		RR42_RS30205	0.43	-4.0
2,151,745	-		RR42_RS30205	0.43	+1.1
2,151,745	-		RR42_RS30205	0.43	-0.6
2,151,745	-		RR42_RS30205	0.43	+1.7
2,151,870	-		RR42_RS30205	0.52	+1.5