Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS30020

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
2,100,471	-		RR42_RS30015	0.22	-0.8
2,100,471	-		RR42_RS30015	0.22	-3.2
2,100,563	-		RR42_RS30015	0.30	+0.5
2,100,663	+		RR42_RS30015	0.38	+2.1
2,100,663	+		RR42_RS30015	0.38	+2.3
2,100,664	-		RR42_RS30015	0.38	+0.0
2,100,664	-		RR42_RS30015	0.38	-1.0
2,100,686	+		RR42_RS30015	0.40	-2.6
2,100,755	-		RR42_RS30015	0.45	+1.8
2,100,755	-		RR42_RS30015	0.45	-1.7
2,100,755	-		RR42_RS30015	0.45	+2.0
2,100,929	+		RR42_RS30015	0.59	-1.3
2,100,929	+		RR42_RS30015	0.59	-3.1
2,100,930	-		RR42_RS30015	0.59	+0.9
2,100,930	-		RR42_RS30015	0.59	-0.4
2,100,930	-		RR42_RS30015	0.59	-1.3
2,100,930	-		RR42_RS30015	0.59	+0.3
2,100,935	+		RR42_RS30015	0.60	-3.6
2,100,935	+		RR42_RS30015	0.60	-1.4
2,100,935	+		RR42_RS30015	0.60	-1.1
2,100,935	+		RR42_RS30015	0.60	+0.8
2,100,936	-		RR42_RS30015	0.60	-1.0
2,100,936	-		RR42_RS30015	0.60	-1.5
2,100,936	-		RR42_RS30015	0.60	-0.1
2,100,936	-		RR42_RS30015	0.60	-2.2
2,100,953	-		RR42_RS30015	0.61	-1.3
2,100,963	+		RR42_RS30015	0.62	+1.6
2,101,112	-		RR42_RS30015	0.74	-1.9
2,101,150	+		RR42_RS30015	0.77	-0.3
2,101,151	-		RR42_RS30015	0.78	-0.5
2,101,151	-		RR42_RS30015	0.78	+1.7
2,101,182	+		RR42_RS30015	0.80	+0.3
2,101,183	-		RR42_RS30015	0.80	-0.2
2,101,317	+				-0.5
2,101,317	+				-3.2
2,101,318	-				+0.6
2,101,321	+				+0.5
2,101,321	+				+1.5
2,101,322	-				+1.5
2,101,354	+				+1.4
2,101,355	-				+0.5
2,101,355	-				+0.7
2,101,367	+				+1.1
2,101,401	+				-0.1
2,101,401	+				-3.3
2,101,402	-				+0.5
2,101,440	-				+0.4
2,101,554	+		RR42_RS30020	0.58	-0.6
2,101,554	+		RR42_RS30020	0.58	-4.0
2,101,560	+		RR42_RS30020	0.61	-0.4
2,101,560	+		RR42_RS30020	0.61	+1.5
2,101,560	+		RR42_RS30020	0.61	+1.1
2,101,560	+		RR42_RS30020	0.61	-0.0
2,101,561	-		RR42_RS30020	0.62	+0.4
2,101,602	+		RR42_RS30020	0.83	-0.0
2,101,602	+		RR42_RS30020	0.83	-0.6
2,101,602	+		RR42_RS30020	0.83	-4.2
2,101,603	-		RR42_RS30020	0.84	-1.1
2,101,603	-		RR42_RS30020	0.84	-0.3
2,101,603	-		RR42_RS30020	0.84	-0.5
2,101,603	-		RR42_RS30020	0.84	-0.5
2,101,679	+				-3.1
2,101,689	+				-4.0
2,101,694	+				-0.6
2,101,706	+				+0.0
2,101,707	-				-4.7
2,101,707	-				+1.5
2,101,707	-				-3.3
2,101,707	-				-1.0
2,101,707	-				-2.7
2,101,726	+				-2.2
2,101,726	+				+0.6
2,101,726	+				+0.7
2,101,726	+				+0.1
2,101,727	-				+1.0
2,101,727	-				+1.4
2,101,727	-				-2.2
2,101,727	-				-1.3
2,101,729	-				+0.3
2,101,778	+				+1.2
2,101,778	+				+0.4
2,101,818	+				-0.6
2,101,818	+				+0.7
2,101,835	+				+2.5
2,101,835	+				+1.6
2,101,836	-				-1.1
2,101,913	+				+0.3
2,101,969	+				+1.1
2,101,969	+				-2.6
2,101,969	+				+0.0
2,101,970	-				-0.2
2,101,970	-				+0.8
2,101,970	-				-4.3
2,101,980	+				+1.0
2,101,981	-				+0.3
2,101,981	-				+2.5
2,102,034	+		RR42_RS30025	0.13	-0.1
2,102,078	+		RR42_RS30025	0.16	+1.3
2,102,079	-		RR42_RS30025	0.16	+0.4
2,102,090	-		RR42_RS30025	0.17	-0.0
2,102,090	-		RR42_RS30025	0.17	-2.7
2,102,090	-		RR42_RS30025	0.17	+1.6
2,102,237	+		RR42_RS30025	0.27	+0.7
2,102,464	+		RR42_RS30025	0.42	+0.3
2,102,480	+		RR42_RS30025	0.43	-1.0
2,102,481	-		RR42_RS30025	0.43	-2.5
2,102,608	+		RR42_RS30025	0.51	+0.0
2,102,608	+		RR42_RS30025	0.51	+0.5
2,102,608	+		RR42_RS30025	0.51	+0.8
2,102,609	-		RR42_RS30025	0.52	+1.6
2,102,609	-		RR42_RS30025	0.52	-2.9
2,102,609	-		RR42_RS30025	0.52	+0.6