Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29360

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,938,466	+		RR42_RS29350	0.76	-1.0
1,938,482	+		RR42_RS29350	0.78	-1.1
1,938,483	-		RR42_RS29350	0.78	+0.2
1,938,498	+		RR42_RS29350	0.80	+1.4
1,938,498	+		RR42_RS29350	0.80	-1.7
1,938,498	+		RR42_RS29350	0.80	+0.4
1,938,498	+		RR42_RS29350	0.80	+1.1
1,938,498	+		RR42_RS29350	0.80	+2.6
1,938,499	-		RR42_RS29350	0.81	-2.2
1,938,499	-		RR42_RS29350	0.81	+1.9
1,938,499	-		RR42_RS29350	0.81	+1.1
1,938,502	+		RR42_RS29350	0.81	-4.2
1,938,502	+		RR42_RS29350	0.81	-1.6
1,938,502	+		RR42_RS29350	0.81	-1.9
1,938,503	-		RR42_RS29350	0.81	-2.0
1,938,503	-		RR42_RS29350	0.81	+2.2
1,938,657	+				+2.7
1,938,811	+		RR42_RS29355	0.34	-1.9
1,938,847	+		RR42_RS29355	0.41	+0.5
1,938,848	-		RR42_RS29355	0.41	+2.0
1,938,893	+		RR42_RS29355	0.50	-1.2
1,938,894	-		RR42_RS29355	0.50	-1.1
1,939,028	+		RR42_RS29355	0.77	+1.1
1,939,029	-		RR42_RS29355	0.78	+0.8
1,939,030	+		RR42_RS29355	0.78	-1.0
1,939,031	-		RR42_RS29355	0.78	+0.8
1,939,046	+		RR42_RS29355	0.81	+0.2
1,939,046	+		RR42_RS29355	0.81	-0.1
1,939,046	+		RR42_RS29355	0.81	+1.2
1,939,047	-		RR42_RS29355	0.81	+0.8
1,939,047	-		RR42_RS29355	0.81	-1.4
1,939,218	+				-0.3
1,939,218	+				-0.3
1,939,218	+				-0.9
1,939,218	+				-0.3
1,939,218	+				-3.0
1,939,219	-				+1.5
1,939,219	-				-0.4
1,939,222	+				-2.6
1,939,222	+				-2.6
1,939,223	-				+1.1
1,939,579	-		RR42_RS29360	0.36	-0.3
1,939,596	+		RR42_RS29360	0.40	+0.9
1,939,604	+		RR42_RS29360	0.41	-1.9
1,939,604	+		RR42_RS29360	0.41	-1.9
1,939,768	+		RR42_RS29360	0.75	-3.0
1,939,769	-		RR42_RS29360	0.75	+2.0
1,939,769	-		RR42_RS29360	0.75	+1.7
1,939,829	+		RR42_RS29360	0.88	-3.3
1,939,830	-		RR42_RS29360	0.88	-2.2
1,939,902	-				-0.4
1,939,926	+				-1.4
1,940,009	+		RR42_RS29365	0.33	+0.4
1,940,009	+		RR42_RS29365	0.33	+1.0
1,940,010	-		RR42_RS29365	0.34	-0.7
1,940,010	-		RR42_RS29365	0.34	+0.7
1,940,234	+				-2.4
1,940,381	+				+0.7
1,940,381	+				+0.8
1,940,381	+				+0.8
1,940,382	-				+0.6
1,940,382	-				+1.6
1,940,382	-				+0.5
1,940,455	+				-0.4
1,940,455	+				-0.8
1,940,569	+				-2.7
1,940,569	+				-0.2
1,940,570	-				-2.1
1,940,570	-				+0.1
1,940,570	-				+0.7
1,940,570	-				+0.4
1,940,570	-				-2.9
1,940,570	-				-0.5
1,940,570	-				+0.2
1,940,574	+		RR42_RS29370	0.10	+0.3
1,940,574	+		RR42_RS29370	0.10	+0.9
1,940,625	+		RR42_RS29370	0.14	+2.0
1,940,626	-		RR42_RS29370	0.14	-2.2
1,940,626	-		RR42_RS29370	0.14	-0.9
1,940,692	+		RR42_RS29370	0.20	+0.4