Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29245

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,914,675	+				+0.6
1,914,675	+				+0.2
1,914,675	+				-0.4
1,914,676	-				+0.2
1,914,676	-				+0.6
1,914,676	-				-4.4
1,914,763	+				+0.9
1,914,763	+				-1.7
1,914,764	-				+0.9
1,914,764	-				+1.9
1,914,764	-				-2.1
1,914,912	-				+0.8
1,915,130	+		RR42_RS29240	0.23	+0.3
1,915,169	+		RR42_RS29240	0.28	+0.1
1,915,169	+		RR42_RS29240	0.28	+1.9
1,915,169	+		RR42_RS29240	0.28	+0.9
1,915,169	+		RR42_RS29240	0.28	+2.0
1,915,169	+		RR42_RS29240	0.28	+1.1
1,915,170	-		RR42_RS29240	0.28	+0.5
1,915,170	-		RR42_RS29240	0.28	-3.3
1,915,170	-		RR42_RS29240	0.28	-2.5
1,915,235	+		RR42_RS29240	0.37	-1.3
1,915,235	+		RR42_RS29240	0.37	-2.4
1,915,235	+		RR42_RS29240	0.37	+1.0
1,915,236	-		RR42_RS29240	0.38	+0.9
1,915,236	-		RR42_RS29240	0.38	-0.5
1,915,236	-		RR42_RS29240	0.38	+2.2
1,915,374	-		RR42_RS29240	0.57	+1.1
1,915,374	-		RR42_RS29240	0.57	+0.1
1,915,409	+		RR42_RS29240	0.62	-0.8
1,915,409	+		RR42_RS29240	0.62	+1.5
1,915,410	-		RR42_RS29240	0.62	-1.0
1,915,410	-		RR42_RS29240	0.62	-1.1
1,915,532	+		RR42_RS29240	0.80	+2.0
1,915,532	+		RR42_RS29240	0.80	-1.9
1,915,533	-		RR42_RS29240	0.80	+1.5
1,915,533	-		RR42_RS29240	0.80	+1.0
1,915,533	-		RR42_RS29240	0.80	+1.1
1,915,596	+		RR42_RS29240	0.89	+1.5
1,915,596	+		RR42_RS29240	0.89	-1.3
1,915,597	-		RR42_RS29240	0.89	-1.9
1,915,742	+		RR42_RS29245	0.10	+0.5
1,915,812	+		RR42_RS29245	0.21	-2.3
1,915,858	+		RR42_RS29245	0.28	-1.1
1,915,858	+		RR42_RS29245	0.28	+2.7
1,915,858	+		RR42_RS29245	0.28	+0.3
1,915,859	-		RR42_RS29245	0.28	+1.5
1,915,859	-		RR42_RS29245	0.28	-0.1
1,915,859	-		RR42_RS29245	0.28	-2.4
1,915,859	-		RR42_RS29245	0.28	+0.5
1,915,873	+		RR42_RS29245	0.30	-1.0
1,915,876	+		RR42_RS29245	0.30	-1.4
1,915,877	-		RR42_RS29245	0.31	-3.3
1,916,131	+		RR42_RS29245	0.68	-0.7
1,916,131	+		RR42_RS29245	0.68	-1.9
1,916,132	-		RR42_RS29245	0.68	+0.3
1,916,230	+				-0.6
1,916,230	+		RR42_RS29245	0.83	+2.0
1,916,231	-		RR42_RS29245	0.83	+2.1
1,916,311	+				+0.6
1,916,312	-				+1.0
1,916,312	-				+0.7
1,916,312	-				+0.7
1,916,579	+		RR42_RS29250	0.63	-0.8
1,916,579	+		RR42_RS29250	0.63	+0.1
1,916,579	+		RR42_RS29250	0.63	+1.6
1,916,579	+		RR42_RS29250	0.63	+2.0
1,916,580	-		RR42_RS29250	0.63	+0.8
1,916,580	-		RR42_RS29250	0.63	-0.2
1,916,580	-		RR42_RS29250	0.63	-0.1
1,916,582	+		RR42_RS29250	0.64	-0.5
1,916,583	-		RR42_RS29250	0.64	+1.2
1,916,583	-		RR42_RS29250	0.64	-3.1
1,916,744	+				+1.0
1,916,825	-				+0.9
1,916,837	+				-0.3
1,916,845	-				+1.2
1,916,960	-		RR42_RS29255	0.11	+2.4
1,916,960	-		RR42_RS29255	0.11	+0.6
1,917,164	+		RR42_RS29255	0.45	+1.1
1,917,164	+		RR42_RS29255	0.45	+1.0
1,917,218	+		RR42_RS29255	0.54	-2.0
1,917,219	-		RR42_RS29255	0.54	+0.4
1,917,219	-		RR42_RS29255	0.54	+2.5
1,917,245	-		RR42_RS29255	0.58	-3.3
1,917,293	+		RR42_RS29255	0.66	+0.3
1,917,294	-		RR42_RS29255	0.66	-3.5
1,917,294	-		RR42_RS29255	0.66	-0.0