Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS29095

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,883,708	+		RR42_RS29090	0.66	+0.3
1,883,914	+		RR42_RS29090	0.80	-1.6
1,883,984	+		RR42_RS29090	0.84	-3.5
1,883,985	-		RR42_RS29090	0.84	-3.0
1,884,025	+		RR42_RS29090	0.87	+2.6
1,884,178	+				+2.0
1,884,178	+				-2.1
1,884,178	+				-2.4
1,884,178	+				+2.3
1,884,178	+				+2.0
1,884,178	+				+0.7
1,884,179	-				+1.4
1,884,179	-				+1.2
1,884,179	-				+0.7
1,884,179	-				-2.4
1,884,304	-				-0.1
1,884,410	+				+0.5
1,884,411	-				-1.5
1,884,457	-				-0.5
1,884,544	-		RR42_RS29095	0.11	-0.2
1,884,544	-		RR42_RS29095	0.11	-3.3
1,884,544	-		RR42_RS29095	0.11	-2.7
1,884,656	-		RR42_RS29095	0.43	+1.9
1,884,707	-		RR42_RS29095	0.58	+2.7
1,884,718	-		RR42_RS29095	0.61	+0.9
1,884,718	-		RR42_RS29095	0.61	-3.2
1,884,989	-				+0.4
1,885,190	-		RR42_RS29100	0.25	+0.1
1,885,249	-		RR42_RS29100	0.30	+1.2
1,885,275	+		RR42_RS29100	0.32	-0.6
1,885,275	+		RR42_RS29100	0.32	-0.0
1,885,276	-		RR42_RS29100	0.32	-2.2
1,885,280	-		RR42_RS29100	0.32	+1.8
1,885,755	+		RR42_RS29100	0.71	-4.4
1,885,756	-		RR42_RS29100	0.71	+1.4
1,885,756	-		RR42_RS29100	0.71	+0.7
1,885,756	-		RR42_RS29100	0.71	+0.5
1,885,759	+		RR42_RS29100	0.71	-0.3
1,885,759	+		RR42_RS29100	0.71	+0.6
1,885,759	+		RR42_RS29100	0.71	+1.8
1,885,760	-		RR42_RS29100	0.71	+0.5
1,885,767	+		RR42_RS29100	0.72	-1.9
1,885,767	+		RR42_RS29100	0.72	-1.7
1,885,768	-		RR42_RS29100	0.72	-0.5
1,885,768	-		RR42_RS29100	0.72	-0.2
1,885,826	+		RR42_RS29100	0.77	-3.0
1,885,826	+		RR42_RS29100	0.77	+1.2
1,885,827	-		RR42_RS29100	0.77	+1.5
1,885,827	-		RR42_RS29100	0.77	+0.1
1,885,827	-		RR42_RS29100	0.77	-1.6