Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28840

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,823,228	+		RR42_RS28835	0.36	+0.8
1,823,228	+		RR42_RS28835	0.36	+1.1
1,823,229	-		RR42_RS28835	0.36	+0.1
1,823,229	-		RR42_RS28835	0.36	+2.8
1,823,229	-		RR42_RS28835	0.36	+1.5
1,823,229	-		RR42_RS28835	0.36	-0.3
1,823,229	-		RR42_RS28835	0.36	-0.1
1,823,511	+		RR42_RS28835	0.57	+0.9
1,823,511	+		RR42_RS28835	0.57	-3.6
1,823,574	-		RR42_RS28835	0.62	-3.0
1,823,574	-		RR42_RS28835	0.62	-1.7
1,823,755	-		RR42_RS28835	0.75	-4.3
1,823,755	-		RR42_RS28835	0.75	-1.9
1,823,911	+		RR42_RS28835	0.87	+1.2
1,823,911	+		RR42_RS28835	0.87	+0.9
1,823,995	-				+0.1
1,824,059	+				+1.5
1,824,059	+				+0.2
1,824,229	+				+0.1
1,824,508	+		RR42_RS28840	0.76	+0.2
1,824,508	+		RR42_RS28840	0.76	-1.7
1,824,508	+		RR42_RS28840	0.76	-2.7
1,824,508	+		RR42_RS28840	0.76	+0.6
1,824,509	-		RR42_RS28840	0.76	-0.9
1,824,596	+				+0.6
1,824,636	+				+1.6
1,824,636	+				+1.2
1,824,636	+				-0.0
1,824,637	-				+0.4
1,824,637	-				+1.6
1,824,637	-				-1.5
1,824,637	-				-0.7
1,824,637	-				-0.4
1,824,637	-				-1.8
1,824,644	+				-2.2
1,824,645	-				-0.3
1,824,848	+		RR42_RS28845	0.14	-0.3
1,825,092	-		RR42_RS28845	0.30	+0.5
1,825,092	-		RR42_RS28845	0.30	-3.5
1,825,092	-		RR42_RS28845	0.30	-2.7
1,825,268	+		RR42_RS28845	0.42	+0.3
1,825,268	+		RR42_RS28845	0.42	+1.4
1,825,275	-		RR42_RS28845	0.42	+3.1
1,825,371	+		RR42_RS28845	0.49	-2.2
1,825,371	+		RR42_RS28845	0.49	-3.6
1,825,371	+		RR42_RS28845	0.49	-0.3
1,825,371	+		RR42_RS28845	0.49	-1.0
1,825,372	-		RR42_RS28845	0.49	+0.4
1,825,547	+		RR42_RS28845	0.61	+0.3