Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS28295

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,707,353	+				+0.6
1,707,354	-				-1.5
1,707,360	-				+0.2
1,707,360	-				+0.7
1,707,374	-				-3.3
1,707,479	-				-0.4
1,707,575	+				-4.5
1,707,794	+		RR42_RS28290	0.38	-3.5
1,707,794	+		RR42_RS28290	0.38	-3.3
1,707,794	+		RR42_RS28290	0.38	-3.8
1,707,795	-		RR42_RS28290	0.39	-5.2
1,708,040	-		RR42_RS28290	0.80	-3.4
1,708,271	+				-1.7
1,708,272	-				+1.0
1,708,272	-				-2.4
1,708,360	+				+1.4
1,708,360	+				-1.6
1,708,409	+		RR42_RS28295	0.13	+0.9
1,708,409	+		RR42_RS28295	0.13	-2.5
1,708,410	-		RR42_RS28295	0.13	-2.3
1,708,498	+		RR42_RS28295	0.21	-1.0
1,708,499	-		RR42_RS28295	0.21	-0.0
1,708,499	-		RR42_RS28295	0.21	-1.4
1,708,508	-		RR42_RS28295	0.21	-3.1
1,708,693	+		RR42_RS28295	0.37	+1.4
1,708,693	+		RR42_RS28295	0.37	-3.5
1,709,014	+		RR42_RS28295	0.64	+0.9
1,709,140	+		RR42_RS28295	0.74	-3.5
1,709,177	+		RR42_RS28295	0.77	+0.7
1,709,252	+		RR42_RS28295	0.83	-2.0
1,709,306	+		RR42_RS28295	0.88	-1.7
1,709,306	+		RR42_RS28295	0.88	+0.8
1,709,306	+		RR42_RS28295	0.88	-3.5
1,709,307	-		RR42_RS28295	0.88	-1.1
1,709,307	-		RR42_RS28295	0.88	+0.6
1,709,307	-		RR42_RS28295	0.88	-1.7
1,709,324	+		RR42_RS28295	0.89	+0.2
1,709,469	-				-0.1
1,709,530	+				-2.2
1,709,665	+		RR42_RS28300	0.22	-2.0
1,709,666	-		RR42_RS28300	0.22	-2.0
1,709,786	+		RR42_RS28300	0.35	-4.0
1,709,787	-		RR42_RS28300	0.35	+2.8
1,709,787	-		RR42_RS28300	0.35	+0.4
1,709,787	-		RR42_RS28300	0.35	-0.1
1,709,787	-		RR42_RS28300	0.35	-2.4
1,710,049	+		RR42_RS28300	0.62	-3.6
1,710,049	+		RR42_RS28300	0.62	-2.4
1,710,050	-		RR42_RS28300	0.62	-1.3
1,710,050	-		RR42_RS28300	0.62	+1.3
1,710,050	-		RR42_RS28300	0.62	+0.0
1,710,091	+		RR42_RS28300	0.66	-0.5
1,710,091	+		RR42_RS28300	0.66	-0.4
1,710,091	+		RR42_RS28300	0.66	-0.6
1,710,091	+		RR42_RS28300	0.66	+0.4
1,710,092	-		RR42_RS28300	0.66	+0.1
1,710,092	-		RR42_RS28300	0.66	-4.9
1,710,167	-		RR42_RS28300	0.74	-3.0
1,710,248	-		RR42_RS28300	0.82	+0.3