Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS27735

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,584,932	+		RR42_RS27730	0.23	-1.6
1,584,932	+		RR42_RS27730	0.23	-0.9
1,584,933	-		RR42_RS27730	0.23	+0.3
1,584,933	-		RR42_RS27730	0.23	+0.9
1,584,934	+		RR42_RS27730	0.23	+1.3
1,584,934	+		RR42_RS27730	0.23	+0.1
1,584,935	-		RR42_RS27730	0.23	+1.7
1,584,935	-		RR42_RS27730	0.23	-0.0
1,584,935	-		RR42_RS27730	0.23	+0.6
1,585,145	+		RR42_RS27730	0.45	-0.8
1,585,146	-		RR42_RS27730	0.45	-0.5
1,585,371	-		RR42_RS27730	0.68	+0.6
1,585,409	+		RR42_RS27730	0.72	-2.6
1,585,409	+		RR42_RS27730	0.72	-0.0
1,585,409	+		RR42_RS27730	0.72	+0.4
1,585,409	+		RR42_RS27730	0.72	-1.9
1,585,410	-		RR42_RS27730	0.72	+0.1
1,585,410	-		RR42_RS27730	0.72	+0.5
1,585,410	-		RR42_RS27730	0.72	-1.7
1,585,416	+		RR42_RS27730	0.73	-0.6
1,585,417	-		RR42_RS27730	0.73	-0.9
1,585,434	+		RR42_RS27730	0.75	+1.4
1,585,434	+		RR42_RS27730	0.75	+0.8
1,585,434	+		RR42_RS27730	0.75	-0.8
1,585,435	-		RR42_RS27730	0.75	+0.6
1,585,619	+				+0.1
1,585,839	+				+0.4
1,585,839	+				-3.8
1,585,840	-				-0.3
1,586,064	+		RR42_RS27735	0.22	-2.8
1,586,064	+		RR42_RS27735	0.22	-1.3
1,586,065	-		RR42_RS27735	0.22	+0.3
1,586,065	-		RR42_RS27735	0.22	-1.6
1,586,172	-		RR42_RS27735	0.37	-1.9
1,586,224	+		RR42_RS27735	0.44	-2.3
1,586,224	+		RR42_RS27735	0.44	+0.1
1,586,225	-		RR42_RS27735	0.44	-1.4
1,586,226	+		RR42_RS27735	0.44	-2.2
1,586,226	+		RR42_RS27735	0.44	-2.0
1,586,226	+		RR42_RS27735	0.44	-2.2
1,586,226	+		RR42_RS27735	0.44	-0.6
1,586,226	+		RR42_RS27735	0.44	-2.8
1,586,227	-		RR42_RS27735	0.44	-2.0
1,586,227	-		RR42_RS27735	0.44	+1.5
1,586,336	+		RR42_RS27735	0.59	-0.2
1,586,336	+		RR42_RS27735	0.59	-3.7
1,586,337	-		RR42_RS27735	0.59	+0.4
1,586,337	-		RR42_RS27735	0.59	-3.0
1,586,538	-		RR42_RS27735	0.87	-5.2
1,586,604	-				-3.6
1,586,604	-				-1.1
1,586,822	+				-2.2
1,586,823	-				+1.1
1,586,827	+				-0.3
1,586,827	+				-0.4
1,586,828	-				+1.8
1,586,828	-				+0.3
1,586,828	-				+1.0
1,586,828	-				-3.1
1,586,836	+				+2.3
1,586,836	+				+0.4
1,586,837	-				-2.8
1,586,839	+				-0.6
1,586,839	+				+0.5
1,586,840	-				-1.2
1,587,426	+		RR42_RS27740	0.44	-0.9
1,587,426	+		RR42_RS27740	0.44	+1.0
1,587,427	-		RR42_RS27740	0.44	+1.8
1,587,560	+		RR42_RS27740	0.53	+2.8
1,587,560	+		RR42_RS27740	0.53	-0.2