Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26935

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,396,825	-		RR42_RS26925	0.85	-0.2
1,396,825	-		RR42_RS26925	0.85	+0.6
1,396,917	+				+0.5
1,396,918	-				+0.2
1,396,981	+				-2.7
1,396,982	-				+0.3
1,396,982	-				+1.3
1,397,046	-				-0.4
1,397,193	-		RR42_RS26930	0.30	+1.3
1,397,225	+		RR42_RS26930	0.36	+0.1
1,397,226	-		RR42_RS26930	0.36	+0.5
1,397,324	+		RR42_RS26930	0.55	-2.7
1,397,324	+		RR42_RS26930	0.55	+1.3
1,397,324	+		RR42_RS26930	0.55	+0.6
1,397,324	+		RR42_RS26930	0.55	+1.7
1,397,324	+		RR42_RS26930	0.55	+1.6
1,397,325	-		RR42_RS26930	0.55	+1.3
1,397,399	+		RR42_RS26930	0.69	-0.6
1,397,403	-		RR42_RS26930	0.70	+0.1
1,397,453	+		RR42_RS26930	0.79	+7.5
1,397,454	-		RR42_RS26930	0.80	+1.6
1,397,454	-		RR42_RS26930	0.80	+0.2
1,397,477	+		RR42_RS26930	0.84	+1.0
1,397,478	-		RR42_RS26930	0.84	+0.2
1,397,478	-		RR42_RS26930	0.84	-4.8
1,397,694	+				-2.2
1,397,797	-				-0.7
1,397,946	+		RR42_RS26935	0.24	-2.5
1,398,085	-		RR42_RS26935	0.37	-0.2
1,398,217	-		RR42_RS26935	0.50	-0.6
1,398,261	+		RR42_RS26935	0.54	-0.5
1,398,262	-		RR42_RS26935	0.54	-1.5
1,398,262	-		RR42_RS26935	0.54	-0.5
1,398,627	+		RR42_RS26935	0.89	-0.2
1,398,681	+				-1.1
1,398,790	+				-1.3
1,398,878	+				+0.5
1,398,878	+				-0.6
1,398,878	+				-1.3
1,398,895	+				+0.9
1,398,896	-				-2.0
1,398,958	-				-0.1
1,399,045	+		RR42_RS26940	0.15	-2.6
1,399,201	+		RR42_RS26940	0.27	+1.0
1,399,201	+		RR42_RS26940	0.27	+1.0
1,399,201	+		RR42_RS26940	0.27	-3.2
1,399,201	+		RR42_RS26940	0.27	-0.0
1,399,202	-		RR42_RS26940	0.27	+0.5
1,399,202	-		RR42_RS26940	0.27	-0.7
1,399,202	-		RR42_RS26940	0.27	+1.8
1,399,204	+		RR42_RS26940	0.27	-2.2
1,399,205	-		RR42_RS26940	0.27	+0.8
1,399,205	-		RR42_RS26940	0.27	-2.5
1,399,450	+		RR42_RS26940	0.46	+0.2
1,399,466	+		RR42_RS26940	0.47	-0.3
1,399,466	+		RR42_RS26940	0.47	+0.9
1,399,466	+				+1.8
1,399,466	+		RR42_RS26940	0.47	+0.6
1,399,467	-		RR42_RS26940	0.47	-4.4
1,399,467	-		RR42_RS26940	0.47	-2.9
1,399,467	-		RR42_RS26940	0.47	+0.3
1,399,467	-		RR42_RS26940	0.47	+2.3
1,399,467	-		RR42_RS26940	0.47	+0.9
1,399,468	+		RR42_RS26940	0.47	+0.8
1,399,469	-		RR42_RS26940	0.47	+0.2
1,399,469	-		RR42_RS26940	0.47	+1.2
1,399,742	+		RR42_RS26940	0.68	+0.5
1,399,742	+		RR42_RS26940	0.68	-0.1
1,399,742	+		RR42_RS26940	0.68	-1.1
1,399,742	+		RR42_RS26940	0.68	+0.4