Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26350
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
1,268,058 | + | -1.6 | |||
1,268,058 | + | +0.1 | |||
1,268,059 | - | +0.6 | |||
1,268,059 | - | -2.6 | |||
1,268,059 | - | +1.0 | |||
1,268,063 | + | -3.2 | |||
1,268,063 | + | +0.6 | |||
1,268,063 | + | -0.2 | |||
1,268,063 | + | -1.0 | |||
1,268,063 | + | +2.0 | |||
1,268,064 | - | +2.9 | |||
1,268,064 | - | +1.9 | |||
1,268,064 | - | -0.8 | |||
1,268,070 | - | -0.6 | |||
1,268,070 | - | +0.8 | |||
1,269,068 | + | RR42_RS26350 | 0.22 | +1.3 | |
1,269,102 | - | RR42_RS26350 | 0.32 | -2.3 | |
1,269,113 | + | RR42_RS26350 | 0.35 | +2.1 | |
1,269,114 | - | RR42_RS26350 | 0.35 | -1.1 | |
1,269,314 | + | +1.7 | |||
1,269,342 | - | -2.6 | |||
1,269,370 | + | -4.0 | |||
1,269,370 | + | +1.7 | |||
1,269,370 | + | +3.0 | |||
1,269,424 | - | -0.5 | |||
1,269,496 | + | -0.6 | |||
1,269,496 | + | -2.8 | |||
1,269,496 | + | +1.7 | |||
1,269,497 | - | +0.3 | |||
1,269,554 | - | +2.5 | |||
1,269,841 | + | RR42_RS26355 | 0.16 | -3.3 | |
1,269,842 | - | RR42_RS26355 | 0.16 | +2.7 | |
1,269,878 | + | RR42_RS26355 | 0.19 | -0.4 |
Or see this region's nucleotide sequence