Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS26295

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,258,296	+		RR42_RS26290	0.48	-0.7
1,258,477	-		RR42_RS26290	0.61	-2.3
1,258,539	-		RR42_RS26290	0.66	-3.1
1,258,860	+				-2.2
1,258,861	-				+0.7
1,258,861	-				+1.7
1,258,861	-				-0.3
1,258,861	-				-1.9
1,258,861	-				+1.1
1,258,861	-				+1.6
1,258,953	+				-0.0
1,258,953	+				+0.3
1,258,953	+				-2.3
1,258,954	-				+2.0
1,258,954	-				+0.2
1,258,955	+				+0.7
1,258,955	+				-3.8
1,258,956	-				+0.7
1,258,956	-				-0.0
1,258,983	+				-0.0
1,258,997	-				-2.4
1,259,041	+				+0.1
1,259,042	-				+0.4
1,259,131	-				-0.8
1,259,131	-				-2.9
1,259,189	-				-0.2
1,259,323	+		RR42_RS26295	0.28	-2.8
1,259,323	+		RR42_RS26295	0.28	-3.0
1,259,324	-		RR42_RS26295	0.28	+0.9
1,259,324	-		RR42_RS26295	0.28	+1.3
1,259,324	-		RR42_RS26295	0.28	+0.0
1,259,394	+		RR42_RS26295	0.38	-0.9
1,259,394	+		RR42_RS26295	0.38	+1.6
1,259,398	+		RR42_RS26295	0.38	+1.0
1,259,399	-		RR42_RS26295	0.38	+1.0
1,259,399	-		RR42_RS26295	0.38	-1.5
1,259,399	-		RR42_RS26295	0.38	-0.6
1,259,602	-		RR42_RS26295	0.66	+0.8
1,259,654	-		RR42_RS26295	0.73	-4.5
1,259,654	-		RR42_RS26295	0.73	+0.1
1,259,654	-		RR42_RS26295	0.73	+0.1
1,259,680	+		RR42_RS26295	0.77	-4.6
1,259,681	-		RR42_RS26295	0.77	-0.8
1,259,872	-				-1.6
1,259,893	+				+1.5
1,259,948	-				+0.5
1,260,174	+		RR42_RS26300	0.17	-0.2
1,260,174	+		RR42_RS26300	0.17	-0.3
1,260,219	+		RR42_RS26300	0.21	+0.1
1,260,219	+		RR42_RS26300	0.21	+0.6
1,260,219	+		RR42_RS26300	0.21	+2.2
1,260,220	-		RR42_RS26300	0.21	-1.4
1,260,222	-		RR42_RS26300	0.21	-4.0
1,260,668	+		RR42_RS26300	0.59	-2.4