Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS25385

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
1,033,377	+		RR42_RS25380	0.32	-3.7
1,033,476	-		RR42_RS25380	0.40	-1.3
1,033,524	+		RR42_RS25380	0.44	+0.5
1,033,706	+		RR42_RS25380	0.59	-1.1
1,034,138	+				-2.8
1,034,138	+				+2.0
1,034,139	-				+0.8
1,034,153	+				-0.8
1,034,322	+				-3.4
1,034,322	+				-0.6
1,034,323	-				-3.6
1,034,332	+				-0.5
1,034,545	+		RR42_RS25385	0.39	+1.2
1,034,545	+		RR42_RS25385	0.39	-3.9
1,034,545	+		RR42_RS25385	0.39	+1.3
1,034,545	+		RR42_RS25385	0.39	-2.3
1,034,546	-		RR42_RS25385	0.39	+0.4
1,034,546	-		RR42_RS25385	0.39	+2.0
1,034,546	-		RR42_RS25385	0.39	+1.6
1,034,546	-		RR42_RS25385	0.39	-0.5
1,034,548	+		RR42_RS25385	0.39	-1.0
1,034,581	+		RR42_RS25385	0.44	-0.2
1,034,581	+		RR42_RS25385	0.44	+0.4
1,034,582	-		RR42_RS25385	0.44	+1.1
1,034,674	+		RR42_RS25385	0.57	-0.6
1,034,675	-		RR42_RS25385	0.57	-0.2
1,034,748	-		RR42_RS25385	0.68	-1.2
1,034,748	-		RR42_RS25385	0.68	+0.6
1,034,748	-		RR42_RS25385	0.68	+1.3
1,034,866	+		RR42_RS25385	0.84	+1.4
1,034,867	-		RR42_RS25385	0.85	+1.1
1,035,176	+				+0.8
1,035,176	+				+2.2
1,035,176	+				-2.5
1,035,176	+				+1.3
1,035,176	+				+3.3
1,035,176	+				-1.2
1,035,176	+				-1.4
1,035,177	-				-0.4
1,035,177	-				-0.8
1,035,177	-				+0.9
1,035,177	-				+1.4
1,035,177	-				+1.2
1,035,337	-				+0.2
1,035,388	+				-0.1
1,035,388	+				-0.7
1,035,421	+		RR42_RS25390	0.13	+2.0
1,035,579	+		RR42_RS25390	0.38	+1.4
1,035,579	+		RR42_RS25390	0.38	-0.5
1,035,579	+		RR42_RS25390	0.38	-3.4
1,035,580	-		RR42_RS25390	0.38	-0.6
1,035,580	-		RR42_RS25390	0.38	-0.4
1,035,801	+		RR42_RS25390	0.73	-1.9
1,035,801	+		RR42_RS25390	0.73	-0.1
1,035,808	-		RR42_RS25390	0.74	-4.3
1,035,808	-		RR42_RS25390	0.74	+0.2
1,035,907	+		RR42_RS25390	0.90	-0.9
1,035,907	+		RR42_RS25390	0.90	-0.1
1,035,907	+		RR42_RS25390	0.90	+1.6
1,035,908	-		RR42_RS25390	0.90	-3.2