Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20800

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,513,643	+				+0.0
4,513,643	+				+1.2
4,513,644	-				+0.4
4,513,732	+		RR42_RS20795	0.11	-1.2
4,513,732	+		RR42_RS20795	0.11	-1.3
4,513,732	+		RR42_RS20795	0.11	+0.2
4,513,732	+		RR42_RS20795	0.11	-2.8
4,513,732	+		RR42_RS20795	0.11	+1.7
4,513,733	-		RR42_RS20795	0.11	+0.7
4,513,733	-		RR42_RS20795	0.11	-0.9
4,513,733	-		RR42_RS20795	0.11	-1.7
4,513,802	+		RR42_RS20795	0.27	+0.6
4,514,020	+		RR42_RS20795	0.75	-2.1
4,514,021	-		RR42_RS20795	0.75	+1.6
4,514,021	-		RR42_RS20795	0.75	+0.9
4,514,031	+		RR42_RS20795	0.77	-0.4
4,514,031	+		RR42_RS20795	0.77	-0.0
4,514,032	-		RR42_RS20795	0.77	+1.0
4,514,222	+				+0.2
4,514,223	-				-3.4
4,514,223	-				-1.4
4,514,240	+				+0.2
4,514,330	+				-1.6
4,514,330	+				-1.2
4,514,331	-				+4.8
4,514,376	+				-3.6
4,514,393	+				-1.5
4,514,395	+				-2.9
4,514,395	+				+3.3
4,514,395	+				-2.4
4,514,395	+				-3.9
4,514,395	+				-0.2
4,514,396	-				+1.4
4,514,396	-				+0.7
4,514,396	-				+1.2
4,514,396	-				+1.1
4,514,396	-				-0.4
4,514,396	-				-1.3
4,514,396	-				+1.4
4,514,586	+				+0.2
4,514,652	+		RR42_RS20800	0.11	-1.3
4,514,652	+		RR42_RS20800	0.11	-0.6
4,514,685	+		RR42_RS20800	0.15	-0.6
4,514,686	-		RR42_RS20800	0.15	+1.0
4,514,740	+		RR42_RS20800	0.21	+0.0
4,514,934	+		RR42_RS20800	0.45	-2.9
4,514,934	+		RR42_RS20800	0.45	+0.1
4,514,934	+		RR42_RS20800	0.45	+0.5
4,514,934	+		RR42_RS20800	0.45	+0.4
4,514,935	-		RR42_RS20800	0.45	-2.2
4,514,935	-		RR42_RS20800	0.45	-4.3
4,514,935	-		RR42_RS20800	0.45	+1.7
4,514,935	-		RR42_RS20800	0.45	-1.1
4,514,935	-		RR42_RS20800	0.45	-2.9
4,514,935	-		RR42_RS20800	0.45	+0.4
4,514,997	+		RR42_RS20800	0.52	-2.1
4,515,088	-		RR42_RS20800	0.63	-0.1
4,515,088	-		RR42_RS20800	0.63	-1.7
4,515,222	+		RR42_RS20800	0.79	+0.6
4,515,222	+		RR42_RS20800	0.79	-0.9
4,515,234	+		RR42_RS20800	0.81	+0.1
4,515,234	+		RR42_RS20800	0.81	-1.3
4,515,234	+		RR42_RS20800	0.81	+0.1
4,515,234	+		RR42_RS20800	0.81	-0.3
4,515,235	-		RR42_RS20800	0.81	-3.6
4,515,255	+		RR42_RS20800	0.83	-1.5
4,515,255	+		RR42_RS20800	0.83	-2.2
4,515,255	+		RR42_RS20800	0.83	+0.1
4,515,256	-		RR42_RS20800	0.84	-2.7
4,515,256	-		RR42_RS20800	0.84	-0.5
4,515,256	-		RR42_RS20800	0.84	-0.4
4,515,256	-		RR42_RS20800	0.84	+0.7
4,515,327	+				+1.6
4,515,327	+				-1.2
4,515,328	-				-1.1
4,515,328	-				+0.3
4,515,328	-				+0.2
4,515,328	-				+0.6
4,515,443	+				+0.7
4,515,444	-				-2.8
4,515,444	-				+0.1
4,515,444	-				+2.9
4,515,444	-				-0.9
4,515,444	-				+0.1