Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS20260

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,382,051	-				-0.7
4,382,051	-				-0.5
4,382,062	+				+1.6
4,382,256	-		RR42_RS20255	0.17	-2.0
4,382,277	+		RR42_RS20255	0.20	+1.5
4,382,277	+		RR42_RS20255	0.20	+0.4
4,382,278	-		RR42_RS20255	0.20	-0.3
4,382,446	+		RR42_RS20255	0.42	-1.8
4,382,446	+		RR42_RS20255	0.42	+0.6
4,382,446	+		RR42_RS20255	0.42	+0.8
4,382,546	+		RR42_RS20255	0.55	-3.8
4,382,546	+		RR42_RS20255	0.55	-0.6
4,382,546	+		RR42_RS20255	0.55	-0.1
4,382,547	-		RR42_RS20255	0.55	-0.5
4,382,547	-		RR42_RS20255	0.55	-3.6
4,382,547	-		RR42_RS20255	0.55	-0.7
4,382,549	-		RR42_RS20255	0.56	+0.8
4,382,549	-		RR42_RS20255	0.56	-0.0
4,382,571	-		RR42_RS20255	0.58	-3.2
4,382,571	-		RR42_RS20255	0.58	-1.5
4,382,621	-		RR42_RS20255	0.65	+0.9
4,382,680	+		RR42_RS20255	0.73	+0.6
4,382,680	+		RR42_RS20255	0.73	-3.7
4,382,681	-		RR42_RS20255	0.73	+0.7
4,382,681	-		RR42_RS20255	0.73	-3.0
4,382,681	-		RR42_RS20255	0.73	-2.6
4,382,681	-		RR42_RS20255	0.73	-0.8
4,382,701	+		RR42_RS20255	0.76	+1.8
4,382,724	-		RR42_RS20255	0.79	-2.7
4,382,724	-		RR42_RS20255	0.79	-3.4
4,382,724	-		RR42_RS20255	0.79	+0.9
4,382,724	-		RR42_RS20255	0.79	+1.6
4,382,724	-		RR42_RS20255	0.79	-0.2
4,382,976	+				-2.5
4,382,976	+				-0.5
4,382,977	-				-0.7
4,383,226	-		RR42_RS20260	0.47	-2.1
4,383,420	+		RR42_RS20260	0.82	-2.3
4,383,420	+		RR42_RS20260	0.82	+0.9
4,383,421	-		RR42_RS20260	0.82	+0.2
4,383,582	+				+0.7
4,383,583	-				+1.3
4,383,583	-				+1.1
4,383,634	+				+3.2
4,383,635	-				+1.9
4,383,635	-				+2.4
4,383,635	-				+1.8
4,383,635	-				-0.2
4,383,639	+				+1.9
4,383,639	+				+1.9
4,383,640	-				+1.1
4,383,641	+				+2.1
4,383,642	-				+1.5
4,383,642	-				+2.1
4,383,657	+				+3.2
4,383,657	+				+0.1
4,383,699	+				+1.6
4,383,700	-				+2.3
4,383,715	+				+2.0
4,383,715	+				+2.5
4,383,716	-				+1.6
4,383,718	-				+1.3
4,383,726	+				-0.9
4,383,726	+				+2.0
4,383,727	-				+2.2
4,383,727	-				+2.9
4,383,753	+				+2.3
4,383,859	+				-0.3
4,383,860	-				-2.7
4,384,184	+		RR42_RS20265	0.38	+1.9
4,384,304	+		RR42_RS20265	0.49	-3.5
4,384,304	+		RR42_RS20265	0.49	+2.5
4,384,305	-		RR42_RS20265	0.49	-0.3
4,384,305	-		RR42_RS20265	0.49	-2.9
4,384,305	-		RR42_RS20265	0.49	-3.6
4,384,305	-		RR42_RS20265	0.49	-0.3
4,384,307	+		RR42_RS20265	0.50	-3.5
4,384,307	+		RR42_RS20265	0.50	-0.2
4,384,307	+		RR42_RS20265	0.50	-3.9
4,384,307	+		RR42_RS20265	0.50	+1.5
4,384,308	-		RR42_RS20265	0.50	+0.2
4,384,308	-		RR42_RS20265	0.50	-0.9
4,384,391	+		RR42_RS20265	0.58	-2.9
4,384,392	-		RR42_RS20265	0.58	+0.9
4,384,454	+		RR42_RS20265	0.64	+0.4
4,384,454	+		RR42_RS20265	0.64	-1.8
4,384,454	+		RR42_RS20265	0.64	-0.7
4,384,454	+		RR42_RS20265	0.64	-2.8
4,384,455	-		RR42_RS20265	0.64	+0.7
4,384,455	-		RR42_RS20265	0.64	+1.3
4,384,455	-		RR42_RS20265	0.64	-1.4
4,384,481	+		RR42_RS20265	0.67	-3.3
4,384,482	-		RR42_RS20265	0.67	-3.7
4,384,493	+		RR42_RS20265	0.68	-1.1
4,384,493	+		RR42_RS20265	0.68	+0.6
4,384,493	+		RR42_RS20265	0.68	-4.6
4,384,494	-		RR42_RS20265	0.68	-1.2