Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS19470

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,204,734	+		RR42_RS19465	0.13	+0.3
4,204,735	-		RR42_RS19465	0.13	+0.8
4,204,807	+		RR42_RS19465	0.28	-1.8
4,204,807	+		RR42_RS19465	0.28	+0.2
4,204,807	+		RR42_RS19465	0.28	-0.4
4,204,807	+		RR42_RS19465	0.28	+1.0
4,204,807	+		RR42_RS19465	0.28	+0.2
4,204,808	-		RR42_RS19465	0.28	-0.6
4,204,941	+		RR42_RS19465	0.55	+0.7
4,204,941	+		RR42_RS19465	0.55	+0.8
4,204,941	+		RR42_RS19465	0.55	+1.9
4,204,941	+		RR42_RS19465	0.55	-0.6
4,204,942	-		RR42_RS19465	0.55	-1.2
4,204,942	-		RR42_RS19465	0.55	-1.5
4,204,942	-		RR42_RS19465	0.55	+1.2
4,204,942	-		RR42_RS19465	0.55	+1.3
4,204,942	-		RR42_RS19465	0.55	-0.3
4,204,949	+		RR42_RS19465	0.57	+0.2
4,204,949	+		RR42_RS19465	0.57	-3.2
4,204,949	+		RR42_RS19465	0.57	+2.1
4,204,949	+		RR42_RS19465	0.57	+0.7
4,204,949	+		RR42_RS19465	0.57	+0.9
4,204,949	+		RR42_RS19465	0.57	-2.3
4,204,950	-		RR42_RS19465	0.57	-3.6
4,204,950	-		RR42_RS19465	0.57	+2.2
4,204,951	+		RR42_RS19465	0.57	-1.2
4,204,951	+		RR42_RS19465	0.57	+0.3
4,204,951	+		RR42_RS19465	0.57	-2.3
4,204,951	+		RR42_RS19465	0.57	-2.7
4,204,951	+		RR42_RS19465	0.57	-0.8
4,204,951	+		RR42_RS19465	0.57	-3.0
4,204,952	-		RR42_RS19465	0.57	-2.7
4,204,952	-		RR42_RS19465	0.57	-1.6
4,204,952	-		RR42_RS19465	0.57	-2.5
4,204,952	-		RR42_RS19465	0.57	+0.7
4,204,952	-		RR42_RS19465	0.57	+0.5
4,205,230	+				+1.8
4,205,231	-				-3.4
4,205,316	+				+0.2
4,205,714	+		RR42_RS19470	0.27	-0.1
4,205,715	-		RR42_RS19470	0.27	-1.6
4,205,849	-		RR42_RS19470	0.50	+0.4
4,205,990	+		RR42_RS19470	0.75	-0.6
4,205,990	+		RR42_RS19470	0.75	+0.7
4,205,990	+		RR42_RS19470	0.75	-0.2
4,205,990	+		RR42_RS19470	0.75	-0.1
4,206,167	+				-0.2
4,206,175	-				-3.1
4,206,208	+				-1.6
4,206,208	+				-3.6
4,206,209	-				+1.4
4,206,209	-				-1.3
4,206,209	-				-0.1
4,206,209	-				-4.0
4,206,211	+				+0.6
4,206,211	+				+1.4
4,206,211	+				+0.5
4,206,211	+				-1.3
4,206,211	+				+2.2
4,206,211	+				-0.7
4,206,211	+				+0.4
4,206,212	-				-1.0
4,206,212	-				-0.2
4,206,212	-				+1.5
4,206,212	-				+1.7
4,206,220	-				+0.3
4,206,234	+				-3.9
4,206,234	+				-2.1
4,206,234	+				+2.2
4,206,235	-				-2.8
4,206,235	-				-2.3
4,206,263	+				+2.2
4,206,263	+				+0.7
4,206,268	+				-1.9
4,206,269	-				-1.4
4,206,292	-				-1.4
4,206,305	+				-1.5
4,206,314	+				-0.3
4,206,314	+				-1.2
4,206,314	+				+1.2
4,206,315	-				+1.0
4,206,315	-				+0.1
4,206,315	-				-0.1
4,206,315	-				-1.9
4,206,315	-				-1.9
4,206,819	+		RR42_RS19475	0.87	+0.8
4,206,819	+		RR42_RS19475	0.87	+0.8
4,206,922	+				+2.2
4,206,922	+				-0.8
4,206,922	+				+0.9
4,206,922	+				-2.8
4,206,922	+				+0.3
4,206,944	-				-2.1
4,206,944	-				+0.2
4,206,944	-				+1.2
4,207,093	+				+1.2
4,207,094	-				+0.9
4,207,095	+				-3.3
4,207,095	+				-0.5
4,207,095	+				-1.6
4,207,096	-				-1.0
4,207,096	-				+0.3