Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18995

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
4,113,913	+		RR42_RS18990	0.87	+0.8
4,113,913	+		RR42_RS18990	0.87	-0.1
4,113,913	+		RR42_RS18990	0.87	+2.6
4,113,914	-		RR42_RS18990	0.87	+2.0
4,113,976	+		RR42_RS18990	0.88	+2.4
4,113,976	+		RR42_RS18990	0.88	+2.9
4,113,977	-		RR42_RS18990	0.88	+2.9
4,113,977	-		RR42_RS18990	0.88	+2.7
4,113,977	-		RR42_RS18990	0.88	+2.5
4,113,983	+		RR42_RS18990	0.89	+3.6
4,113,983	+		RR42_RS18990	0.89	+3.0
4,113,983	+		RR42_RS18990	0.89	+2.1
4,114,213	+				+1.2
4,114,213	+				+3.2
4,114,214	-				+2.5
4,114,214	-				+2.3
4,114,264	+				+1.1
4,114,265	-				+2.3
4,114,403	+				+1.8
4,114,403	+				+2.4
4,114,403	+				+3.9
4,114,403	+				+0.7
4,114,403	+				+3.1
4,114,404	-				+3.3
4,114,404	-				+2.9
4,114,453	+				+0.9
4,114,453	+				+3.6
4,114,453	+				+1.2
4,114,453	+				+2.8
4,114,453	+				+2.2
4,114,454	-				+3.7
4,114,454	-				+2.5
4,114,454	-				+4.1
4,114,454	-				+2.5
4,114,732	-				+3.0
4,114,732	-				+3.1
4,114,733	+				+1.2
4,114,734	-				+3.1
4,114,734	-				+3.8
4,114,734	-				+2.3
4,114,829	+				+2.2
4,114,867	+				+1.2
4,114,867	+				+0.8
4,114,868	-				+1.2
4,114,868	-				-0.6
4,114,886	-				+0.3
4,114,909	+				-0.4
4,114,909	+				+1.4
4,114,910	-				-0.1
4,115,110	+		RR42_RS18995	0.28	+3.4
4,115,110	+		RR42_RS18995	0.28	+3.6
4,115,135	+		RR42_RS18995	0.31	+2.5
4,115,136	-		RR42_RS18995	0.32	+1.9
4,115,272	+		RR42_RS18995	0.50	+2.4
4,115,272	+		RR42_RS18995	0.50	+3.5
4,115,272	+		RR42_RS18995	0.50	+2.1
4,115,272	+		RR42_RS18995	0.50	+2.1
4,115,272	+		RR42_RS18995	0.50	+2.5
4,115,273	-		RR42_RS18995	0.50	+1.2
4,115,273	-		RR42_RS18995	0.50	+1.3
4,115,273	-		RR42_RS18995	0.50	-1.0
4,115,372	-		RR42_RS18995	0.64	+3.0
4,115,470	+		RR42_RS18995	0.78	+2.5
4,115,470	+		RR42_RS18995	0.78	+0.2
4,115,470	+		RR42_RS18995	0.78	+2.8
4,115,470	+		RR42_RS18995	0.78	+2.2
4,115,471	-		RR42_RS18995	0.78	+0.7
4,115,471	-		RR42_RS18995	0.78	-0.8
4,115,525	-		RR42_RS18995	0.85	-1.1
4,115,525	-		RR42_RS18995	0.85	-1.2
4,115,525	-		RR42_RS18995	0.85	+1.8
4,115,534	-		RR42_RS18995	0.87	+1.3
4,115,534	-		RR42_RS18995	0.87	-3.2
4,115,534	-		RR42_RS18995	0.87	-0.6
4,115,653	+				+0.6
4,115,653	+				+1.3
4,115,653	+				+0.9
4,115,653	+				-2.2
4,115,654	-				+1.0
4,115,654	-				-1.1
4,115,654	-				-1.6
4,115,701	+				+0.1
4,115,702	-				+0.0
4,115,702	-				-1.9
4,115,755	-				+0.2
4,115,826	+				+0.5
4,115,826	+				-0.8
4,115,826	+				-2.2
4,115,827	-				-2.6
4,115,827	-				-0.4
4,115,827	-				-3.8
4,115,950	+		RR42_RS19000	0.17	+0.8
4,115,950	+		RR42_RS19000	0.17	-1.1
4,115,950	+		RR42_RS19000	0.17	-0.8
4,115,950	+		RR42_RS19000	0.17	-3.3
4,115,950	+		RR42_RS19000	0.17	+0.7
4,115,950	+		RR42_RS19000	0.17	-0.6
4,115,950	+		RR42_RS19000	0.17	-4.3
4,115,950	+		RR42_RS19000	0.17	+0.2
4,115,950	+		RR42_RS19000	0.17	-2.5
4,115,950	+		RR42_RS19000	0.17	-0.5
4,115,950	+		RR42_RS19000	0.17	-0.5
4,115,951	-		RR42_RS19000	0.17	-0.8
4,115,951	-		RR42_RS19000	0.17	-0.6
4,115,951	-		RR42_RS19000	0.17	-3.3
4,115,951	-		RR42_RS19000	0.17	-3.8
4,115,951	-		RR42_RS19000	0.17	+0.3
4,115,951	-		RR42_RS19000	0.17	+1.0
4,115,951	-		RR42_RS19000	0.17	+0.5
4,115,951	-		RR42_RS19000	0.17	+0.4
4,115,951	-		RR42_RS19000	0.17	+2.6
4,115,951	-		RR42_RS19000	0.17	+0.7
4,115,951	-		RR42_RS19000	0.17	+0.4
4,115,951	-		RR42_RS19000	0.17	-2.0
4,115,951	-		RR42_RS19000	0.17	+1.5
4,115,964	+		RR42_RS19000	0.19	-1.9
4,115,965	-		RR42_RS19000	0.19	+1.7
4,115,974	-		RR42_RS19000	0.19	+0.6
4,116,070	+		RR42_RS19000	0.28	-0.0
4,116,149	+		RR42_RS19000	0.35	-1.6
4,116,297	+		RR42_RS19000	0.48	-0.3
4,116,298	-		RR42_RS19000	0.48	+0.1
4,116,298	-		RR42_RS19000	0.48	-2.7
4,116,492	-		RR42_RS19000	0.65	+1.5
4,116,492	-		RR42_RS19000	0.65	-0.3