Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS18365

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,980,184	+				+1.4
3,980,185	-				+1.2
3,980,185	-				-1.8
3,980,185	-				-2.2
3,980,185	-				-1.3
3,980,334	+				-2.3
3,980,335	-				-3.3
3,980,600	+				-1.6
3,980,601	-				-0.4
3,981,117	-		RR42_RS18365	0.56	-1.1
3,981,117	-		RR42_RS18365	0.56	-3.2
3,981,350	+		RR42_RS18365	0.77	-2.0
3,981,351	-		RR42_RS18365	0.77	-1.1
3,981,476	+		RR42_RS18365	0.89	+1.4
3,981,490	+				-0.6
3,981,490	+				-3.3
3,981,491	-				+0.2
3,981,491	-				-2.4
3,981,494	+				-2.3
3,981,495	-				-0.4
3,981,495	-				-1.7
3,981,495	-				-3.0
3,981,552	-				-1.1
3,981,552	-				-3.3
3,981,661	+				-2.5
3,981,685	+				-0.2
3,981,686	-				-0.6
3,981,734	+				-1.1
3,981,870	-				+0.1
3,981,870	-				-1.7
3,981,896	+				-0.4
3,981,897	-				+0.5
3,981,961	+		RR42_RS18370	0.11	-1.1
3,981,961	+		RR42_RS18370	0.11	-2.8
3,981,961	+		RR42_RS18370	0.11	+0.9
3,981,961	+		RR42_RS18370	0.11	+1.3
3,981,962	-		RR42_RS18370	0.11	-1.6
3,981,962	-		RR42_RS18370	0.11	+0.7
3,981,978	+		RR42_RS18370	0.12	+1.3
3,981,979	-		RR42_RS18370	0.12	-0.4
3,981,979	-		RR42_RS18370	0.12	-2.5
3,982,061	-		RR42_RS18370	0.19	-0.6
3,982,061	-		RR42_RS18370	0.19	-2.1
3,982,212	+		RR42_RS18370	0.31	-2.2
3,982,231	+		RR42_RS18370	0.32	+0.1
3,982,231	+		RR42_RS18370	0.32	-1.8
3,982,232	-		RR42_RS18370	0.32	-1.6
3,982,232	-		RR42_RS18370	0.32	+1.7
3,982,257	+		RR42_RS18370	0.34	+0.6
3,982,258	-		RR42_RS18370	0.34	+0.3
3,982,258	-		RR42_RS18370	0.34	-1.0
3,982,258	-		RR42_RS18370	0.34	+1.7
3,982,329	+		RR42_RS18370	0.40	-1.5
3,982,329	+		RR42_RS18370	0.40	+0.7
3,982,330	-		RR42_RS18370	0.40	-0.8
3,982,541	+		RR42_RS18370	0.57	+1.5
3,982,542	-		RR42_RS18370	0.57	+0.1