Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17860
Experiment: LB
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | LB |
---|---|---|---|---|---|
remove | |||||
3,863,106 | - | -4.3 | |||
3,863,106 | - | -2.1 | |||
3,863,106 | - | -0.6 | |||
3,863,106 | - | +0.3 | |||
3,863,114 | - | +2.0 | |||
3,863,136 | - | -0.6 | |||
3,866,197 | - | +1.7 | |||
3,866,336 | - | +1.2 | |||
3,866,340 | - | -2.7 | |||
3,866,533 | + | +1.2 | |||
3,866,566 | + | -0.1 | |||
3,866,733 | - | RR42_RS17865 | 0.23 | -0.7 | |
3,866,740 | + | RR42_RS17865 | 0.24 | -3.0 | |
3,866,741 | - | RR42_RS17865 | 0.24 | -3.3 | |
3,867,055 | + | RR42_RS17865 | 0.74 | -1.8 | |
3,867,055 | + | RR42_RS17865 | 0.74 | -2.4 | |
3,867,055 | + | RR42_RS17865 | 0.74 | -1.1 | |
3,867,055 | + | RR42_RS17865 | 0.74 | -2.9 | |
3,867,055 | + | RR42_RS17865 | 0.74 | +0.7 | |
3,867,055 | + | RR42_RS17865 | 0.74 | -2.9 | |
3,867,055 | + | RR42_RS17865 | 0.74 | -2.0 | |
3,867,056 | - | RR42_RS17865 | 0.74 | +0.2 | |
3,867,056 | - | RR42_RS17865 | 0.74 | +1.6 | |
3,867,056 | - | RR42_RS17865 | 0.74 | -0.3 | |
3,867,056 | - | RR42_RS17865 | 0.74 | -4.1 |
Or see this region's nucleotide sequence