Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS17610

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,808,966	-				+1.6
3,808,981	-		RR42_RS17605	0.12	-3.2
3,808,983	+		RR42_RS17605	0.12	-0.6
3,808,984	-		RR42_RS17605	0.13	-1.7
3,809,019	-		RR42_RS17605	0.22	-0.2
3,809,019	-		RR42_RS17605	0.22	-2.5
3,809,019	-		RR42_RS17605	0.22	+0.0
3,809,019	-		RR42_RS17605	0.22	-2.4
3,809,019	-		RR42_RS17605	0.22	+0.5
3,809,019	-		RR42_RS17605	0.22	-0.8
3,809,019	-		RR42_RS17605	0.22	-2.1
3,809,077	-		RR42_RS17605	0.38	+1.5
3,809,077	-		RR42_RS17605	0.38	+1.2
3,809,077	-		RR42_RS17605	0.38	-0.1
3,809,110	-		RR42_RS17605	0.47	+1.0
3,809,110	-		RR42_RS17605	0.47	+0.9
3,809,110	-		RR42_RS17605	0.47	-0.0
3,809,110	-		RR42_RS17605	0.47	+0.9
3,809,140	-		RR42_RS17605	0.55	+0.6
3,809,205	-		RR42_RS17605	0.73	-3.2
3,809,505	+				-2.9
3,809,517	-				+0.2
3,809,530	-				+0.2
3,809,547	-				-0.5
3,809,647	+				-3.1
3,809,647	+				-1.3
3,809,647	+				-2.7
3,809,703	+				-1.5
3,809,710	+				-2.2
3,809,782	+				-4.4
3,809,783	-				+0.6
3,809,859	+				-3.3
3,809,859	+				-0.8
3,809,859	+				-2.2
3,809,859	+				-1.4
3,810,240	+		RR42_RS17610	0.23	-2.0
3,810,240	+		RR42_RS17610	0.23	-2.9
3,810,240	+		RR42_RS17610	0.23	-3.8
3,810,240	+		RR42_RS17610	0.23	-1.8
3,810,240	+		RR42_RS17610	0.23	-3.8
3,810,241	-		RR42_RS17610	0.23	-2.5
3,810,241	-		RR42_RS17610	0.23	-0.6
3,810,276	+		RR42_RS17610	0.25	-0.4
3,810,277	-		RR42_RS17610	0.25	-2.5
3,810,394	-		RR42_RS17610	0.30	-2.2
3,810,394	-		RR42_RS17610	0.30	-2.5
3,810,394	-		RR42_RS17610	0.30	-2.7
3,810,394	-		RR42_RS17610	0.30	-0.2
3,810,432	+		RR42_RS17610	0.31	-2.0
3,810,432	+		RR42_RS17610	0.31	-3.8
3,810,432	+		RR42_RS17610	0.31	-2.6
3,810,432	+		RR42_RS17610	0.31	-2.9
3,810,433	-		RR42_RS17610	0.31	-2.5
3,810,433	-		RR42_RS17610	0.31	-2.6
3,810,433	-		RR42_RS17610	0.31	-4.0
3,810,433	-		RR42_RS17610	0.31	-4.4
3,810,433	-		RR42_RS17610	0.31	-4.0
3,810,445	-		RR42_RS17610	0.32	-2.7
3,810,678	+		RR42_RS17610	0.42	-3.5
3,810,678	+		RR42_RS17610	0.42	-2.7
3,810,678	+		RR42_RS17610	0.42	-3.4
3,810,679	-		RR42_RS17610	0.42	-3.1
3,810,679	-		RR42_RS17610	0.42	-1.8
3,810,679	-		RR42_RS17610	0.42	-3.2
3,810,679	-		RR42_RS17610	0.42	-1.7
3,810,849	+		RR42_RS17610	0.49	-4.2
3,810,882	+		RR42_RS17610	0.51	-1.7
3,810,882	+		RR42_RS17610	0.51	-4.6
3,811,302	+		RR42_RS17610	0.69	-1.2
3,811,303	-		RR42_RS17610	0.69	+1.2
3,811,333	+		RR42_RS17610	0.70	-5.1
3,811,333	+		RR42_RS17610	0.70	-4.3
3,811,334	-		RR42_RS17610	0.70	-0.2
3,811,545	+		RR42_RS17610	0.79	-4.2
3,811,545	+		RR42_RS17610	0.79	-2.5
3,811,546	-		RR42_RS17610	0.79	-6.5
3,811,546	-		RR42_RS17610	0.79	-3.3
3,811,546	-		RR42_RS17610	0.79	-3.6
3,811,546	-		RR42_RS17610	0.79	-2.4
3,811,800	+				-1.4
3,811,845	+				-2.9
3,811,846	-				-2.9
3,811,846	-				-3.1
3,811,945	-				-3.4
3,812,056	-				-3.2
3,812,063	+				-4.0
3,812,064	-				+0.8
3,812,064	-				-4.6
3,812,064	-				-1.9
3,812,095	+				-1.4
3,812,154	+				-2.6
3,812,155	-				-0.6
3,812,155	-				-1.9
3,812,188	+				-1.5
3,812,189	-				-0.2
3,812,189	-				+1.2
3,812,193	+				-2.8
3,812,193	+				-3.0
3,812,193	+				-1.5
3,812,193	+				-3.9