Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS16710

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,616,478	+		RR42_RS16705	0.27	-0.6
3,616,479	-		RR42_RS16705	0.27	-2.8
3,616,584	+		RR42_RS16705	0.38	-3.6
3,616,635	+		RR42_RS16705	0.43	-2.9
3,616,635	+		RR42_RS16705	0.43	-1.7
3,616,635	+		RR42_RS16705	0.43	+1.4
3,616,636	-		RR42_RS16705	0.43	+0.4
3,616,636	-		RR42_RS16705	0.43	+1.5
3,616,636	-		RR42_RS16705	0.43	-0.3
3,616,636	-		RR42_RS16705	0.43	+2.4
3,616,636	-		RR42_RS16705	0.43	+2.4
3,616,669	-		RR42_RS16705	0.47	-0.9
3,616,669	-		RR42_RS16705	0.47	+1.3
3,616,690	+		RR42_RS16705	0.49	+2.4
3,616,690	+		RR42_RS16705	0.49	-2.7
3,616,691	-		RR42_RS16705	0.49	+0.7
3,616,691	-		RR42_RS16705	0.49	+1.1
3,616,762	-		RR42_RS16705	0.57	-2.5
3,616,926	+		RR42_RS16705	0.74	+0.6
3,616,927	-		RR42_RS16705	0.74	-1.0
3,617,002	+		RR42_RS16705	0.82	+1.9
3,617,049	+		RR42_RS16705	0.87	-2.3
3,617,282	+				+1.7
3,617,282	+				-1.0
3,617,283	-				+0.7
3,617,283	-				-0.3
3,617,373	-				-3.1
3,617,373	-				-2.6
3,617,444	+		RR42_RS16710	0.19	-2.0
3,617,444	+		RR42_RS16710	0.19	+0.5
3,617,445	-		RR42_RS16710	0.19	-0.8
3,617,445	-		RR42_RS16710	0.19	-0.3
3,617,445	-		RR42_RS16710	0.19	+0.0
3,617,451	+		RR42_RS16710	0.20	+0.5
3,617,643	+		RR42_RS16710	0.71	-0.1
3,617,644	-		RR42_RS16710	0.71	+0.9
3,617,644	-		RR42_RS16710	0.71	-0.6
3,617,795	-				-2.3
3,618,053	+		RR42_RS16715	0.63	-2.7
3,618,133	-		RR42_RS16715	0.89	+0.1
3,618,224	+				-0.4
3,618,319	+				+2.8
3,618,320	-				-0.2
3,618,370	-				+1.5
3,618,371	+				-1.3
3,618,371	-				+1.4
3,618,372	-				-4.7
3,618,372	-				+1.0
3,618,615	-				-2.3