Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15615

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,372,867	+		RR42_RS15605	0.86	-1.0
3,372,925	+				-2.0
3,372,925	+				+1.7
3,372,926	-				+1.0
3,372,927	+				-2.0
3,372,927	+				-0.1
3,372,928	-				-2.1
3,372,928	-				-1.7
3,372,928	-				-0.4
3,372,965	-				+0.0
3,373,029	+				-1.4
3,373,030	-				-1.7
3,373,190	+		RR42_RS15610	0.25	+1.1
3,373,286	+		RR42_RS15610	0.49	+1.3
3,373,287	-		RR42_RS15610	0.49	-0.3
3,373,287	-		RR42_RS15610	0.49	+0.6
3,373,287	-		RR42_RS15610	0.49	+0.8
3,373,439	+		RR42_RS15610	0.86	+1.1
3,373,792	+				-1.8
3,373,845	+				-1.8
3,373,963	+		RR42_RS15615	0.14	-1.4
3,373,963	+		RR42_RS15615	0.14	+2.0
3,373,963	+		RR42_RS15615	0.14	+1.4
3,373,964	-		RR42_RS15615	0.15	-2.4
3,373,964	-		RR42_RS15615	0.15	-1.4
3,374,129	+		RR42_RS15615	0.32	+1.2
3,374,129	+		RR42_RS15615	0.32	+0.6
3,374,130	-		RR42_RS15615	0.32	-1.0
3,374,130	-		RR42_RS15615	0.32	-2.9
3,374,308	+		RR42_RS15615	0.51	+1.4
3,374,309	-		RR42_RS15615	0.51	+0.7
3,374,309	-		RR42_RS15615	0.51	+0.4
3,374,311	+		RR42_RS15615	0.52	+0.4
3,374,312	-		RR42_RS15615	0.52	-1.8
3,374,312	-		RR42_RS15615	0.52	-0.1
3,374,329	+		RR42_RS15615	0.54	-0.6
3,374,329	+		RR42_RS15615	0.54	+0.0
3,374,330	-		RR42_RS15615	0.54	-0.6
3,374,330	-		RR42_RS15615	0.54	+0.2
3,374,330	-		RR42_RS15615	0.54	+0.7
3,374,447	-		RR42_RS15615	0.66	-0.2
3,374,648	-		RR42_RS15615	0.88	-1.8
3,374,762	-				-1.3
3,374,762	-				-0.1
3,374,771	+				-0.8
3,374,811	-				-0.0
3,374,924	+				+1.0
3,374,924	+				+1.0
3,374,925	-				-1.3
3,375,010	+		RR42_RS15620	0.13	+0.0
3,375,010	+		RR42_RS15620	0.13	+0.7
3,375,012	+		RR42_RS15620	0.16	-0.9
3,375,012	+		RR42_RS15620	0.16	+0.9
3,375,012	+		RR42_RS15620	0.16	+1.0
3,375,022	+		RR42_RS15620	0.29	+0.1
3,375,040	+		RR42_RS15620	0.53	+0.8
3,375,041	-		RR42_RS15620	0.55	-1.4
3,375,339	+		RR42_RS15625	0.25	-3.3
3,375,744	+		RR42_RS15625	0.77	+0.4
3,375,744	+		RR42_RS15625	0.77	-3.5
3,375,744	+		RR42_RS15625	0.77	-1.6
3,375,744	+		RR42_RS15625	0.77	+1.1
3,375,745	-		RR42_RS15625	0.77	+2.0
3,375,745	-		RR42_RS15625	0.77	-0.1
3,375,745	-		RR42_RS15625	0.77	-1.0