Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15360

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,322,068	+		RR42_RS15355	0.31	-1.1
3,322,308	+		RR42_RS15355	0.60	-3.5
3,322,308	+		RR42_RS15355	0.60	+1.3
3,322,309	-		RR42_RS15355	0.60	-0.2
3,322,347	-		RR42_RS15355	0.64	-2.7
3,322,347	-		RR42_RS15355	0.64	+0.7
3,322,941	-		RR42_RS15360	0.26	-0.7
3,322,982	+		RR42_RS15360	0.30	+4.4
3,322,982	+		RR42_RS15360	0.30	-0.0
3,322,983	-		RR42_RS15360	0.30	-3.5
3,323,033	+		RR42_RS15360	0.35	-4.0
3,323,033	+		RR42_RS15360	0.35	-0.7
3,323,033	+		RR42_RS15360	0.35	-3.6
3,323,033	+		RR42_RS15360	0.35	+1.6
3,323,033	+		RR42_RS15360	0.35	-2.7
3,323,033	+		RR42_RS15360	0.35	-0.1
3,323,033	+		RR42_RS15360	0.35	+0.3
3,323,033	+		RR42_RS15360	0.35	-0.6
3,323,033	+		RR42_RS15360	0.35	-1.1
3,323,034	-		RR42_RS15360	0.35	+1.7
3,323,034	-		RR42_RS15360	0.35	-1.0
3,323,034	-		RR42_RS15360	0.35	+1.1
3,323,073	-		RR42_RS15360	0.38	-4.4
3,323,662	+				-0.8
3,323,663	-				+0.7
3,323,663	-				+0.2
3,323,757	+				-5.2
3,323,757	+				-0.8
3,323,757	+				-1.7
3,323,757	+				-0.9
3,323,757	+				-0.3
3,323,757	+				+2.0
3,323,758	-				-3.3
3,323,758	-				+1.1
3,323,758	-				+2.2
3,323,758	-				-0.0
3,323,758	-				+1.4
3,323,758	-				+0.4
3,323,758	-				+0.2
3,323,758	-				-0.5
3,323,758	-				-3.5
3,323,758	-				+0.0
3,323,853	+				+0.7
3,323,854	-				+0.8
3,323,854	-				+3.5
3,323,854	-				+1.3
3,323,893	-				+0.5
3,323,894	+				-2.9
3,324,045	+		RR42_RS15365	0.21	+1.0
3,324,140	+		RR42_RS15365	0.38	-2.9
3,324,140	+		RR42_RS15365	0.38	+1.5
3,324,140	+		RR42_RS15365	0.38	-0.0
3,324,140	+		RR42_RS15365	0.38	-1.3
3,324,141	-		RR42_RS15365	0.38	-1.3
3,324,196	+		RR42_RS15365	0.48	+0.9
3,324,196	+		RR42_RS15365	0.48	+0.8
3,324,196	+		RR42_RS15365	0.48	+0.4
3,324,197	-		RR42_RS15365	0.48	+1.8
3,324,197	-		RR42_RS15365	0.48	-0.1
3,324,197	-		RR42_RS15365	0.48	+0.2
3,324,554	+		RR42_RS15370	0.12	+1.0
3,324,554	+		RR42_RS15370	0.12	-0.2
3,324,554	+		RR42_RS15370	0.12	-2.5
3,324,555	-		RR42_RS15370	0.12	-3.6
3,324,563	+		RR42_RS15370	0.14	-2.7
3,324,564	-		RR42_RS15370	0.14	+0.3
3,324,564	-		RR42_RS15370	0.14	+1.4