Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15350

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,319,620	+		RR42_RS15345	0.43	+0.8
3,319,620	+		RR42_RS15345	0.43	-0.3
3,319,620	+		RR42_RS15345	0.43	-0.3
3,319,620	+		RR42_RS15345	0.43	+2.4
3,319,621	-		RR42_RS15345	0.43	-0.1
3,319,621	-		RR42_RS15345	0.43	+1.4
3,319,621	-		RR42_RS15345	0.43	+2.1
3,319,621	-		RR42_RS15345	0.43	+1.2
3,319,621	-		RR42_RS15345	0.43	-3.6
3,319,992	+		RR42_RS15345	0.66	-1.5
3,319,992	+		RR42_RS15345	0.66	+1.2
3,319,992	+		RR42_RS15345	0.66	-1.0
3,319,992	+		RR42_RS15345	0.66	-0.8
3,319,993	-		RR42_RS15345	0.67	+0.8
3,319,993	-		RR42_RS15345	0.67	-0.8
3,319,993	-		RR42_RS15345	0.67	-2.3
3,319,993	-		RR42_RS15345	0.67	-1.8
3,320,382	+				-3.3
3,320,382	+				+0.9
3,320,383	-				+1.2
3,320,392	+				+1.8
3,320,392	+				+2.0
3,320,393	-				+3.8
3,320,404	+				-3.2
3,320,404	+				-0.9
3,320,404	+				-2.9
3,320,641	+		RR42_RS15350	0.11	-0.7
3,320,711	+		RR42_RS15350	0.16	+1.0
3,320,711	+		RR42_RS15350	0.16	-2.6
3,320,711	-		RR42_RS15350	0.16	-2.6
3,320,847	-		RR42_RS15350	0.27	+0.1
3,320,912	+		RR42_RS15350	0.32	-0.2
3,320,912	+		RR42_RS15350	0.32	+0.6
3,320,937	-		RR42_RS15350	0.34	+0.5
3,320,987	+		RR42_RS15350	0.38	+0.3
3,320,987	+		RR42_RS15350	0.38	-0.6
3,320,988	-		RR42_RS15350	0.38	-0.6
3,320,988	-		RR42_RS15350	0.38	+0.4
3,320,991	-		RR42_RS15350	0.39	+0.6
3,320,991	-		RR42_RS15350	0.39	+0.8
3,321,134	+		RR42_RS15350	0.50	+0.4
3,321,134	+		RR42_RS15350	0.50	-1.3
3,321,134	+		RR42_RS15350	0.50	+1.9
3,321,135	-		RR42_RS15350	0.50	-1.8
3,321,194	+		RR42_RS15350	0.55	+0.7
3,321,195	-		RR42_RS15350	0.55	+0.8
3,321,198	-		RR42_RS15350	0.55	-2.2
3,321,332	+		RR42_RS15350	0.66	-0.4
3,321,332	+		RR42_RS15350	0.66	-0.5
3,321,333	-		RR42_RS15350	0.66	+1.0
3,321,333	-		RR42_RS15350	0.66	+3.3
3,321,333	-		RR42_RS15350	0.66	-1.5
3,321,521	+		RR42_RS15350	0.81	+0.4
3,321,521	+		RR42_RS15350	0.81	-1.4
3,321,521	+		RR42_RS15350	0.81	+0.9
3,321,522	-		RR42_RS15350	0.81	-1.8
3,321,522	-		RR42_RS15350	0.81	+0.7
3,321,522	-		RR42_RS15350	0.81	+0.1
3,321,602	+		RR42_RS15350	0.88	+0.6
3,321,603	-		RR42_RS15350	0.88	-3.2
3,321,603	-		RR42_RS15350	0.88	-1.5
3,321,603	-		RR42_RS15350	0.88	-4.5
3,322,068	+		RR42_RS15355	0.31	-1.1
3,322,308	+		RR42_RS15355	0.60	-3.5
3,322,308	+		RR42_RS15355	0.60	+1.3
3,322,309	-		RR42_RS15355	0.60	-0.2
3,322,347	-		RR42_RS15355	0.64	-2.7
3,322,347	-		RR42_RS15355	0.64	+0.7