Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15285

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,306,392	+		RR42_RS15280	0.59	+1.7
3,306,392	+		RR42_RS15280	0.59	+2.0
3,306,452	+		RR42_RS15280	0.62	+0.3
3,306,452	+		RR42_RS15280	0.62	+0.9
3,306,455	-		RR42_RS15280	0.62	+1.5
3,306,601	+		RR42_RS15280	0.71	+1.0
3,306,602	-		RR42_RS15280	0.71	-3.6
3,306,625	+		RR42_RS15280	0.72	+1.0
3,306,626	-		RR42_RS15280	0.72	+0.0
3,306,745	+		RR42_RS15280	0.79	-2.2
3,306,745	+		RR42_RS15280	0.79	+1.0
3,306,745	+		RR42_RS15280	0.79	+0.3
3,306,745	+		RR42_RS15280	0.79	-2.8
3,306,745	+		RR42_RS15280	0.79	+1.0
3,306,746	-		RR42_RS15280	0.79	-0.3
3,306,746	-		RR42_RS15280	0.79	-3.4
3,306,820	+		RR42_RS15280	0.83	+0.0
3,306,820	+		RR42_RS15280	0.83	-0.0
3,306,821	-		RR42_RS15280	0.84	+0.7
3,306,851	+		RR42_RS15280	0.85	-3.0
3,306,851	+		RR42_RS15280	0.85	+1.1
3,306,852	-		RR42_RS15280	0.85	-2.6
3,306,852	-		RR42_RS15280	0.85	+0.4
3,306,852	-		RR42_RS15280	0.85	-3.3
3,306,853	+		RR42_RS15280	0.85	+0.9
3,306,853	+		RR42_RS15280	0.85	-1.2
3,306,854	-		RR42_RS15280	0.85	+0.3
3,306,854	-		RR42_RS15280	0.85	-4.2
3,306,854	-		RR42_RS15280	0.85	+0.8
3,306,854	-		RR42_RS15280	0.85	-2.6
3,306,854	-		RR42_RS15280	0.85	+0.7
3,306,854	-		RR42_RS15280	0.85	+1.9
3,307,013	-				-3.6
3,307,013	-				+0.1
3,307,103	+				-0.8
3,307,123	+				+0.2
3,307,190	-				+3.1
3,307,226	+				+3.1
3,307,226	+				+0.8
3,307,295	-				-1.2
3,307,295	-				+0.9
3,307,374	+				+1.5
3,307,375	-				-3.5
3,307,375	-				+2.5
3,307,666	+		RR42_RS15285	0.36	+0.7
3,307,667	-		RR42_RS15285	0.36	+0.2
3,307,678	-		RR42_RS15285	0.37	-3.4
3,307,811	+		RR42_RS15285	0.53	+0.4
3,307,811	+		RR42_RS15285	0.53	-1.7
3,307,811	+		RR42_RS15285	0.53	-0.2
3,307,811	+		RR42_RS15285	0.53	+0.7
3,307,811	+		RR42_RS15285	0.53	+1.2
3,307,812	-		RR42_RS15285	0.53	-0.1
3,307,812	-		RR42_RS15285	0.53	-4.1
3,307,812	-		RR42_RS15285	0.53	-1.6
3,307,902	-		RR42_RS15285	0.64	+0.2
3,308,048	+		RR42_RS15285	0.81	+0.4
3,308,207	+				-1.5
3,308,207	+				+1.6
3,308,208	-				+0.7
3,308,208	-				-2.3
3,308,208	-				+0.2
3,308,248	-				-2.2
3,308,398	+		RR42_RS15290	0.32	-0.5
3,308,399	-		RR42_RS15290	0.32	-0.1
3,308,662	+				-0.6
3,308,671	+				-2.0
3,308,671	+				+1.3
3,308,672	-				-1.9
3,308,672	-				+2.0
3,308,672	-				-2.5
3,308,672	-				+1.5
3,308,672	-				+0.5
3,309,119	+				-2.1
3,309,119	+				-0.8