Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS15280

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,304,727	+				+1.7
3,304,866	+		RR42_RS15275	0.21	+1.7
3,304,866	+		RR42_RS15275	0.21	+1.1
3,304,878	-		RR42_RS15275	0.23	-1.3
3,305,034	+		RR42_RS15275	0.49	-0.6
3,305,035	-		RR42_RS15275	0.50	-2.0
3,305,123	+		RR42_RS15275	0.65	-0.3
3,305,286	+				+0.2
3,305,287	-				+0.6
3,305,287	-				-3.5
3,305,287	-				+0.7
3,305,506	+				-2.3
3,305,507	-				-2.5
3,305,507	-				-0.1
3,305,507	-				-1.6
3,305,512	+				-1.2
3,305,512	+				-0.9
3,305,512	+				+1.3
3,305,513	-				-0.2
3,305,668	+		RR42_RS15280	0.16	-3.9
3,305,669	-		RR42_RS15280	0.16	+2.5
3,305,669	-		RR42_RS15280	0.16	-0.2
3,305,669	-		RR42_RS15280	0.16	+2.7
3,305,749	+		RR42_RS15280	0.21	-4.2
3,305,749	+		RR42_RS15280	0.21	-2.9
3,305,749	+		RR42_RS15280	0.21	-0.2
3,305,749	+		RR42_RS15280	0.21	+1.2
3,305,750	-		RR42_RS15280	0.21	-2.1
3,305,750	-		RR42_RS15280	0.21	-3.2
3,305,794	+		RR42_RS15280	0.24	+0.3
3,305,794	+		RR42_RS15280	0.24	+0.2
3,305,948	+		RR42_RS15280	0.33	-0.1
3,305,949	-		RR42_RS15280	0.33	+1.7
3,306,035	-		RR42_RS15280	0.38	-1.5
3,306,035	-		RR42_RS15280	0.38	+0.5
3,306,035	-		RR42_RS15280	0.38	-0.6
3,306,046	+		RR42_RS15280	0.38	+1.4
3,306,047	-		RR42_RS15280	0.38	+0.9
3,306,047	-		RR42_RS15280	0.38	-0.6
3,306,050	+		RR42_RS15280	0.39	-4.2
3,306,118	+		RR42_RS15280	0.43	+1.0
3,306,119	-		RR42_RS15280	0.43	+2.1
3,306,188	+		RR42_RS15280	0.47	+0.2
3,306,270	-		RR42_RS15280	0.51	+1.1
3,306,301	+		RR42_RS15280	0.53	+0.8
3,306,392	+		RR42_RS15280	0.59	+1.7
3,306,392	+		RR42_RS15280	0.59	+2.0
3,306,452	+		RR42_RS15280	0.62	+0.3
3,306,452	+		RR42_RS15280	0.62	+0.9
3,306,455	-		RR42_RS15280	0.62	+1.5
3,306,601	+		RR42_RS15280	0.71	+1.0
3,306,602	-		RR42_RS15280	0.71	-3.6
3,306,625	+		RR42_RS15280	0.72	+1.0
3,306,626	-		RR42_RS15280	0.72	+0.0
3,306,745	+		RR42_RS15280	0.79	-2.2
3,306,745	+		RR42_RS15280	0.79	+1.0
3,306,745	+		RR42_RS15280	0.79	+0.3
3,306,745	+		RR42_RS15280	0.79	-2.8
3,306,745	+		RR42_RS15280	0.79	+1.0
3,306,746	-		RR42_RS15280	0.79	-0.3
3,306,746	-		RR42_RS15280	0.79	-3.4
3,306,820	+		RR42_RS15280	0.83	+0.0
3,306,820	+		RR42_RS15280	0.83	-0.0
3,306,821	-		RR42_RS15280	0.84	+0.7
3,306,851	+		RR42_RS15280	0.85	-3.0
3,306,851	+		RR42_RS15280	0.85	+1.1
3,306,852	-		RR42_RS15280	0.85	-2.6
3,306,852	-		RR42_RS15280	0.85	+0.4
3,306,852	-		RR42_RS15280	0.85	-3.3
3,306,853	+		RR42_RS15280	0.85	+0.9
3,306,853	+		RR42_RS15280	0.85	-1.2
3,306,854	-		RR42_RS15280	0.85	+0.3
3,306,854	-		RR42_RS15280	0.85	-4.2
3,306,854	-		RR42_RS15280	0.85	+0.8
3,306,854	-		RR42_RS15280	0.85	-2.6
3,306,854	-		RR42_RS15280	0.85	+0.7
3,306,854	-		RR42_RS15280	0.85	+1.9
3,307,013	-				-3.6
3,307,013	-				+0.1
3,307,103	+				-0.8
3,307,123	+				+0.2
3,307,190	-				+3.1
3,307,226	+				+3.1
3,307,226	+				+0.8
3,307,295	-				-1.2
3,307,295	-				+0.9
3,307,374	+				+1.5
3,307,375	-				-3.5
3,307,375	-				+2.5
3,307,666	+		RR42_RS15285	0.36	+0.7
3,307,667	-		RR42_RS15285	0.36	+0.2
3,307,678	-		RR42_RS15285	0.37	-3.4
3,307,811	+		RR42_RS15285	0.53	+0.4
3,307,811	+		RR42_RS15285	0.53	-1.7
3,307,811	+		RR42_RS15285	0.53	-0.2
3,307,811	+		RR42_RS15285	0.53	+0.7
3,307,811	+		RR42_RS15285	0.53	+1.2
3,307,812	-		RR42_RS15285	0.53	-0.1
3,307,812	-		RR42_RS15285	0.53	-4.1
3,307,812	-		RR42_RS15285	0.53	-1.6
3,307,902	-		RR42_RS15285	0.64	+0.2
3,308,048	+		RR42_RS15285	0.81	+0.4