Strain Fitness in Cupriavidus basilensis FW507-4G11 around RR42_RS14630

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
3,145,398	+				+0.1
3,145,443	+				-1.3
3,145,443	+				-0.2
3,145,443	+				+1.6
3,145,443	+				+2.0
3,145,444	-				-2.1
3,145,539	+		RR42_RS14625	0.17	-1.6
3,145,605	+		RR42_RS14625	0.24	+1.5
3,146,156	+		RR42_RS14625	0.82	+0.1
3,146,157	-		RR42_RS14625	0.83	+1.2
3,146,411	+				+0.5
3,146,412	-				-0.3
3,146,505	-		RR42_RS14630	0.13	+0.5
3,146,666	+		RR42_RS14630	0.25	-0.5
3,146,666	+		RR42_RS14630	0.25	-3.9
3,146,667	-		RR42_RS14630	0.25	+0.6
3,146,811	+		RR42_RS14630	0.36	+0.4
3,146,812	-		RR42_RS14630	0.36	-1.6
3,146,831	+		RR42_RS14630	0.38	+1.4
3,146,831	+		RR42_RS14630	0.38	+3.4
3,146,831	+		RR42_RS14630	0.38	-1.2
3,146,832	-		RR42_RS14630	0.38	+0.6
3,146,843	+		RR42_RS14630	0.39	-3.2
3,146,844	-		RR42_RS14630	0.39	-0.8
3,146,844	-		RR42_RS14630	0.39	-2.3
3,146,846	+		RR42_RS14630	0.39	+0.7
3,146,847	-		RR42_RS14630	0.39	+0.6
3,146,847	-		RR42_RS14630	0.39	+0.7
3,146,856	+		RR42_RS14630	0.40	-2.0
3,146,856	+		RR42_RS14630	0.40	+0.6
3,146,857	-		RR42_RS14630	0.40	+0.3
3,146,857	-		RR42_RS14630	0.40	+0.7
3,146,857	-		RR42_RS14630	0.40	+2.0
3,146,857	-		RR42_RS14630	0.40	+1.2
3,146,858	+		RR42_RS14630	0.40	+0.0
3,146,859	-		RR42_RS14630	0.40	-2.6
3,146,859	-		RR42_RS14630	0.40	-0.8
3,147,153	-		RR42_RS14630	0.63	+0.8
3,147,153	-		RR42_RS14630	0.63	+0.9
3,147,153	-		RR42_RS14630	0.63	-3.0
3,147,180	-		RR42_RS14630	0.65	-0.1
3,147,287	+		RR42_RS14630	0.73	+1.1
3,147,288	-		RR42_RS14630	0.73	-0.2
3,147,377	+		RR42_RS14630	0.80	+1.3
3,147,377	+		RR42_RS14630	0.80	+0.1
3,147,377	+		RR42_RS14630	0.80	-1.7
3,147,377	+		RR42_RS14630	0.80	+0.5
3,147,479	+		RR42_RS14630	0.87	+0.4
3,147,479	+		RR42_RS14630	0.87	-2.7
3,147,480	-		RR42_RS14630	0.88	+1.4
3,147,480	-		RR42_RS14630	0.88	+1.3
3,147,512	+				+0.8
3,147,513	-				+2.6
3,147,513	-				-2.1
3,147,647	+				+0.6
3,147,647	+				+0.8
3,147,648	-				+0.7
3,147,663	+				+1.9
3,147,664	-				-3.2
3,147,722	+				-0.9
3,148,168	+		RR42_RS14635	0.24	+2.2
3,148,168	+		RR42_RS14635	0.24	+0.2
3,148,169	-		RR42_RS14635	0.25	-1.4
3,148,169	-		RR42_RS14635	0.25	-0.6
3,148,169	-		RR42_RS14635	0.25	+0.7
3,148,169	-		RR42_RS14635	0.25	-0.9
3,148,288	+		RR42_RS14635	0.33	-2.2
3,148,288	+		RR42_RS14635	0.33	+1.4
3,148,289	-		RR42_RS14635	0.33	+1.2
3,148,289	-		RR42_RS14635	0.33	+0.3
3,148,289	-		RR42_RS14635	0.33	+0.5
3,148,355	+		RR42_RS14635	0.38	+1.4
3,148,445	-		RR42_RS14635	0.44	-1.7
3,148,445	-		RR42_RS14635	0.44	-2.0
3,148,445	-		RR42_RS14635	0.44	-2.3
3,148,445	-		RR42_RS14635	0.44	+0.9
3,148,477	+		RR42_RS14635	0.47	+0.1
3,148,477	+		RR42_RS14635	0.47	+1.7
3,148,477	+		RR42_RS14635	0.47	+0.4
3,148,478	-		RR42_RS14635	0.47	+1.9